RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ARPC4P59998 168 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 SEC61GP60059 68 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 RPL27P61353 136 aaKnown RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 CSNK1G2P78368 415 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 KDSRQ06136 332 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 FGL1Q08830 312 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 FADDQ13158 208 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 DMC1Q14565 340 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 TRIP10Q15642 601 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 EOGTQ5NDL2 527 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 SAPCD1Q5SSQ6 148 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 WSCD1Q658N2 575 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 DMKNQ6E0U4 476 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 TMEM225Q6GV28 225 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 PYHIN1Q6K0P9 492 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 FRA10AC1Q70Z53 315 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 NDUFAF7Q7L592 441 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 SSX9Q7RTT3 188 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 SCD5Q86SK9 330 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 VRK2Q86Y07 508 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 VSTM4Q8IW00 320 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 GTPBP8Q8N3Z3 284 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 GATSQ8NAP1 163 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 UBA3Q8TBC4 463 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 ZNF596Q8TC21 504 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 M1APQ8TC57 530 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 RAET1EQ8TD07 263 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 HAS2Q92819 552 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 MCHR2Q969V1 340 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 ZBED6CLQ96FA7 236 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 GPR137Q96N19 417 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 TSNARE1Q96NA8 513 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 ZNF317Q96PQ6 595 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 ALS2CR12Q96Q35 445 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 OMDQ99983 421 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 CBWD1Q9BRT8 395 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 ROPN1BQ9BZX4 212 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 DPEP3Q9H4B8 488 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 RANBP3Q9H6Z4 567 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 MRPL47Q9HD33 250 aaKnown RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 MRPS30Q9NP92 439 aaKnown RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 PNO1Q9NRX1 252 aaKnown RBP3.05□□□□□ -1.92
BRCA1-229ENST00000621897 ACOXLQ9NUZ1 547 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 EURLQ9NYK6 297 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 NKIRAS1Q9NYS0 192 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 COPS7AQ9UBW8 275 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 PISDQ9UG56 409 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 CLEC4EQ9ULY5 219 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 B9D1Q9UPM9 204 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 PIGLQ9Y2B2 252 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 RHBDD3Q9Y3P4 386 aa3.05□□□□□ -1.92
BRCA1-229ENST00000621897 NEURL4Q96JN8 1562 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 TMEM120BA0PK00 339 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 TMEM210A6NLX4 147 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 E7ENQ6 273 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 H0Y9J4 135 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 M0R296 226 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 SDHDO14521 159 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 KDELR3O43731 214 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 DUX1O43812 170 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 DUSP11O75319 330 aaKnown RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 RBBP9O75884 186 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 ATP5HO75947 161 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 FTH1P02794 183 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 EZRP15311 586 aaKnown RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 GNSP15586 552 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 IL32P24001 234 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 FCARP24071 287 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 CD80P33681 288 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 MDH2P40926 338 aaKnown RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 MEOX2P50222 304 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 SLC26A2P50443 739 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 CCR4P51679 360 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 CDH6P55285 790 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 STX17P56962 302 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 VBP1P61758 197 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 BDH1Q02338 343 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 PLOD1Q02809 727 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 LRRC63Q05C16 580 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 MSLNQ13421 630 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 ELAVL3Q14576 367 aaKnown RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 ALKBH6Q3KRA9 238 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 BEX5Q5H9J7 111 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 PAGE2BQ5JRK9 111 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 WDR25Q64LD2 544 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 SNRNP48Q6IEG0 339 aaKnown RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 LHFPL4Q7Z7J7 247 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 CBWD2Q8IUF1 395 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 LRRC34Q8IZ02 419 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 THEM5Q8N1Q8 247 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 PQLC3Q8N755 202 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 OR7G1Q8NGA0 311 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 OR13C9Q8NGT0 318 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 DTX3LQ8TDB6 740 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 SPRYD4Q8WW59 207 aaPredicted RBP3.04□□□□□ -1.92
BRCA1-229ENST00000621897 PIGCQ92535 297 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 MRGPRFQ96AM1 343 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 FAM122AQ96E09 287 aa3.04□□□□□ -1.92
BRCA1-229ENST00000621897 GUCD1Q96NT3 240 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms