RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ZNF273Q14593 569 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 NDUFA9Q16795 377 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM207Q6UWW9 146 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 FAM24BQ8N5W8 94 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 OR2G2Q8NGZ5 317 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 SMPDL3AQ92484 453 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 CPPED1Q9BRF8 314 aaPredicted RBP4.71□□□□□ -1.65
VPS13D-214ENST00000620676 ISG20L2Q9H9L3 353 aaKnown RBP4.71□□□□□ -1.65
VPS13D-214ENST00000620676 XKRY2A2RUG3 117 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 K7ERQ8 282 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 PMM2O15305 246 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 OPN1LWP04000 364 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 GDPD4Q6W3E5 623 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF75AQ96N20 296 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 SLCO5A1Q9H2Y9 848 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 KCMF1Q9P0J7 381 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 SLC6A14Q9UN76 642 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 DIP2BQ9P265 1576 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 RFPL4AA6NLU0 287 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 C19orf81C9J6K1 198 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 RFPL4AL1F8VTS6 287 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 PYCARD-AS1I3L0S3 204 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 AOC2O75106 756 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 ARL6IP5O75915 188 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 SLC35G4P0C7Q5 338 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 ATP5C1P36542 298 aaKnown RBP4.71□□□□□ -1.65
VPS13D-214ENST00000620676 PBX3P40426 434 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 EPHB3P54753 998 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 DHODHQ02127 395 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 GRHL2Q6ISB3 625 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 GAREM2Q75VX8 874 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 PRICKLE2Q7Z3G6 844 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 CSNK1A1LQ8N752 337 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 SECTM1Q8WVN6 248 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 BTF3L4Q96K17 158 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 CMKLR1Q99788 373 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 PRR13Q9NZ81 148 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 V9GYS6 101 aa4.71□□□□□ -1.65
VPS13D-214ENST00000620676 SURF4O15260 269 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 PLPP4Q5VZY2 271 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF709Q8N972 641 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 L3MBTL4Q8NA19 623 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 OR5H2Q8NGV7 314 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 PTCHD1Q96NR3 888 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TMPRSS5Q9H3S3 457 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 UBE2J1Q9Y385 318 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 DSCR3O14972 297 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 IL33O95760 270 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 S100A8P05109 93 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 PET100P0DJ07 73 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 GNB3P16520 340 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SNRPNP63162 240 aaKnown RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 YBX1P67809 324 aaKnown RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SGCGQ13326 291 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM201Q5SNT2 666 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF550Q7Z398 422 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM163Q8TC26 289 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 RAB3CQ96E17 227 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 KATNB1Q9BVA0 655 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ANKRD26Q9UPS8 1709 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TET3O43151 1660 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ERI3O43414 337 aaKnown RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 DFFBO76075 338 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ASGR2P07307 311 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ACP5P13686 325 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 CXCR1P25024 350 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 LAP3P28838 519 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 FRKP42685 505 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 PTTG1IPP53801 180 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 LTBQ06643 244 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 OR8G1Q15617 311 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 PYCR3Q53H96 274 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TXNDC8Q6A555 127 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 CLEC20AQ6ZU45 233 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM135Q86UB9 458 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SUSD6Q92537 303 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 DNAJB11Q9UBS4 358 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 RENP00797 406 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 THBS1P07996 1170 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 CD9P21926 228 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TACR1P25103 407 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 PCBP3P57721 371 aaKnown RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SLC35A2P78381 396 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SLC35F5Q8WV83 523 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SIRT5Q9NXA8 310 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 TAC3Q9UHF0 121 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 B4GALT2O60909 372 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SERPINA5P05154 406 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 BMP5P22003 454 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 SLC1A3P43003 542 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 EVX1P49640 407 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 IL10RBQ08334 325 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 MLLT11Q13015 90 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF630Q2M218 657 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-214ENST00000620676 NIPAL3Q6P499 406 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 OR5AK2Q8NH90 309 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 ENKD1Q9H0I2 346 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 C11orf49Q9H6J7 331 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 DLL4Q9NR61 685 aa4.71□□□□□ -1.66
VPS13D-214ENST00000620676 NDRG4Q9ULP0 352 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms