RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ZNF474Q6S9Z5 364 aaPredicted RBP14.27□□□□□ -0.13
BRCA1-228ENST00000618469 DLEU7Q6UYE1 221 aa14.27□□□□□ -0.13
BRCA1-228ENST00000618469 RETREG3Q86VR2 466 aa14.27□□□□□ -0.13
BRCA1-228ENST00000618469 ZNF440Q8IYI8 595 aa14.27□□□□□ -0.13
BRCA1-228ENST00000618469 DNAJA3Q96EY1 480 aa14.27□□□□□ -0.13
BRCA1-228ENST00000618469 CCDC134Q9H6E4 229 aa14.27□□□□□ -0.13
BRCA1-228ENST00000618469 BCL2L10Q9HD36 194 aa14.27□□□□□ -0.13
BRCA1-228ENST00000618469 GLRX2Q9NS18 164 aa14.27□□□□□ -0.13
BRCA1-228ENST00000618469 TMED7-TICAM2A0A0A6YYA0 188 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 EVPLLA8MZ36 301 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 POU2F1P14859 743 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 ENPP1P22413 925 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 CCKARP32238 428 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 CD79BP40259 229 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 HTR3AP46098 478 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 DIO1P49895 249 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 POLR2HP52434 150 aaKnown RBP14.26□□□□□ -0.13
BRCA1-228ENST00000618469 MTPNP58546 118 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 RAC3P60763 192 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 FAM27E3Q08E93 113 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 NFYCQ13952 458 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 RNPS1Q15287 305 aaKnown RBP14.26□□□□□ -0.13
BRCA1-228ENST00000618469 EXOC3L2Q2M3D2 409 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 ZNF311Q5JNZ3 666 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 GTF2IRD2BQ6EKJ0 949 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 GTF2IRD2Q86UP8 949 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 DPP10Q8N608 796 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 ZNF610Q8N9Z0 462 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 FOXC2Q99958 501 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 GPATCH1Q9BRR8 931 aaKnown RBP14.26□□□□□ -0.13
BRCA1-228ENST00000618469 SPATA9Q9BWV2 254 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 OR11A1Q9GZK7 315 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 C12orf49Q9H741 205 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 KLHL13Q9P2N7 655 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 PLEKHA6Q9Y2H5 1048 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 TMED7Q9Y3B3 224 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 GMEB1Q9Y692 573 aa14.26□□□□□ -0.13
BRCA1-228ENST00000618469 SH3D21A4FU49 640 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 A6NNC1 897 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 SULT2B1O00204 365 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 FAAHO00519 579 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 SMAD9O15198 467 aaKnown RBP14.25□□□□□ -0.13
BRCA1-228ENST00000618469 ATP8B1O43520 1251 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 PGM3O95394 542 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 FESP07332 822 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 TACR3P29371 465 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 MDH1P40925 334 aaKnown RBP14.25□□□□□ -0.13
BRCA1-228ENST00000618469 SLC1A3P43003 542 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 CSNK2A1P68400 391 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-228ENST00000618469 CDK6Q00534 326 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 LTBQ06643 244 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 SCARB2Q14108 478 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 RUNDC3AQ59EK9 446 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 TMEM201Q5SNT2 666 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 REEP3Q6NUK4 255 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 SERPINA11Q86U17 422 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 CLIP4Q8N3C7 705 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 CADM2Q8N3J6 435 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 TSPEARQ8WU66 669 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 ANKRD27Q96NW4 1050 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 CGREF1Q99674 301 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 SLC39A3Q9BRY0 314 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 CXXC4Q9H2H0 198 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 ARMC7Q9H6L4 198 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 OSGIN1Q9UJX0 560 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 ZNF232Q9UNY5 417 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 IFT52Q9Y366 437 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 FBN3Q75N90 2809 aa14.25□□□□□ -0.13
BRCA1-228ENST00000618469 TMEM72A0PK05 275 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 FAM221AA4D161 298 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 FRS3O43559 492 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 CTAG2O75638 210 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 EPXP11678 715 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 PRG2P13727 222 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 ETS2P15036 469 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 GPX2P18283 190 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 AQP1P29972 269 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 COPZ1P61923 177 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 SELPLGQ14242 412 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 CAPRIN1Q14444 709 aaKnown RBP14.24□□□□□ -0.13
BRCA1-228ENST00000618469 CYP51A1Q16850 503 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 ZSWIM7Q19AV6 140 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 FBXW10Q5XX13 1052 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 TMPPEQ6ZT21 453 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 ZNF550Q7Z398 422 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 ADGRG3Q86Y34 549 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 KRT73Q86Y46 540 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 TUSC5Q8IXB3 177 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 SLC43A2Q8N370 569 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 ZHX1-C8orf76Q96EF9 292 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 ARL5BQ96KC2 179 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 POLDIP3Q9BY77 421 aaKnown RBP14.24□□□□□ -0.13
BRCA1-228ENST00000618469 CLEC4MQ9H2X3 399 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-228ENST00000618469 TMEM38AQ9H6F2 299 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 MRGBPQ9NV56 204 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 ELOVL5Q9NYP7 299 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 KLHL14Q9P2G3 628 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 KLHL9Q9P2J3 617 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 ANGPT4Q9Y264 503 aa14.24□□□□□ -0.13
BRCA1-228ENST00000618469 CHST2Q9Y4C5 530 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms