RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TMEM203Q969S6 136 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 LGALS12Q96DT0 336 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 TRIM2Q9C040 744 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 FN3KQ9H479 309 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 CCNB1IP1Q9NPC3 277 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 KLHL1Q9NR64 748 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 NPFFR2Q9Y5X5 522 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 CDH10Q9Y6N8 788 aa7.12□□□□□ -1.27
NEK3-207ENST00000617054 MGAQ8IWI9 3026 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 IGKV1D-42A0A075B6H8 117 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 MCIDASD6RGH6 385 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 MPZL2O60487 215 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 CPNE3O75131 537 aaKnown RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 CD59P13987 128 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 TACR3P29371 465 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 RPS5P46782 204 aaKnown RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 HCCSP53701 268 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 EGR4Q05215 589 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 BIKQ13323 160 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 TSTQ16762 297 aaKnown RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 BTBD16Q32M84 506 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 YOD1Q5VVQ6 348 aaPredicted RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 OTPQ5XKR4 325 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 P2RY8Q86VZ1 359 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 SVOPQ8N4V2 548 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 ATP6V1C2Q8NEY4 427 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 OR9Q1Q8NGQ5 310 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 OR4K13Q8NH42 304 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 GATAD2BQ8WXI9 593 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 YIPF6Q96EC8 236 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 KTI12Q96EK9 354 aaPredicted RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 ART5Q96L15 291 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 SLC38A2Q96QD8 506 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 LPAR4Q99677 370 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 DOK1Q99704 481 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 TAPBPLQ9BX59 468 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 MCCC2Q9HCC0 563 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 ENAMQ9NRM1 1142 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 PISDQ9UG56 409 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 ENPP5Q9UJA9 477 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 ZNF346Q9UL40 294 aaKnown RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 CFL2Q9Y281 166 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 A0A087WUJ7 227 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 A0A1B0GVG6 124 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 SH3D21A4FU49 640 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 SAGE2PA6NJ88 616 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 ELOA3DA6NLF2 546 aaPredicted RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 VSTM2BA6NLU5 285 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 FAM171A2A8MVW0 826 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 BHLHE40O14503 412 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 FMO6PO60774 539 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 NOL3O60936 208 aaKnown RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 PTP4A3O75365 173 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 CSO75390 466 aaKnown RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 KLF7O75840 302 aaPredicted RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 F13BP05160 661 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 KLK3P07288 261 aaPredicted RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 UMODP07911 640 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 HBQ1P09105 142 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 IFI6P09912 130 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 FGF5P12034 268 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 TTKP33981 857 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 EVI2BP34910 448 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 ATP6V1E1P36543 226 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 MTNR1AP48039 350 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 CDH11P55287 796 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 CSNK2BP67870 215 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 FOXK2Q01167 660 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 ELOA3BQ3SY89 546 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 AP1ARQ63HQ0 302 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 MRPL14Q6P1L8 145 aaKnown RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 DHRS13Q6UX07 377 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 CLDN22Q8N7P3 220 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 SDR9C7Q8NEX9 313 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 ELOA3Q8NG57 546 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 OR51G2Q8NGK0 314 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 TRUB1Q8WWH5 349 aaKnown RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 PTP4A1Q93096 173 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 TMEM80Q96HE8 168 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 Q96MT0 163 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 MGLLQ99685 303 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 CHCHD6Q9BRQ6 235 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 ANKRD10Q9NXR5 420 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 MED11Q9P086 117 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 VDAC3Q9Y277 283 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 RPL36Q9Y3U8 105 aaKnown RBP7.11□□□□□ -1.27
NEK3-207ENST00000617054 NUP210LQ5VU65 1888 aa7.11□□□□□ -1.27
NEK3-207ENST00000617054 A0A1W2PNU3 283 aaPredicted RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 EFCAB10A6NFE3 127 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ERVH48-1M5A8F1 160 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 MAGEB4O15481 346 aaPredicted RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 RPL4P36578 427 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 TMBIM6P55061 237 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 RPS7P62081 194 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 TUBA3CQ13748 450 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 IL11RAQ14626 422 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 PLA2G2CQ5R387 149 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ZNF362Q5T0B9 420 aaPredicted RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 UBE2UQ5VVX9 321 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 LYPD4Q6UWN0 246 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms