RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 RFPL3SP0C7P2 107 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 PGCP20142 388 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 CD247P20963 164 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 DNASE1P24855 282 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 RYKP34925 604 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 ASCL1P50553 236 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 SUMO3P55854 103 aaPredicted RBP13.41□□□□□ -0.26
UBXN1-218ENST00000616865 COPZ1P61923 177 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 MS4A2Q01362 244 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 HSPB2Q16082 182 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 FXNQ16595 210 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 DUSP7Q16829 419 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 GLIPR1L2Q4G1C9 344 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 IFI44LQ53G44 452 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 SEM1Q6ZVN7 128 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 RANBP3LQ86VV4 465 aaPredicted RBP13.41□□□□□ -0.26
UBXN1-218ENST00000616865 CDC20BQ86Y33 519 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 GRAMD2AQ8IUY3 354 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 OR2M3Q8NG83 312 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 OR5W2Q8NH69 310 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 ZNF563Q8TA94 476 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 VANGL1Q8TAA9 524 aaPredicted RBP13.41□□□□□ -0.26
UBXN1-218ENST00000616865 RSRC1Q96IZ7 334 aaKnown RBP13.41□□□□□ -0.26
UBXN1-218ENST00000616865 HSH2DQ96JZ2 352 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 SLC6A15Q9H2J7 730 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 EXOSC3Q9NQT5 275 aaKnown RBP13.41□□□□□ -0.26
UBXN1-218ENST00000616865 RPS6KB2Q9UBS0 482 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 C15orf41Q9Y2V0 281 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 SH3GLB1Q9Y371 365 aa13.41□□□□□ -0.26
UBXN1-218ENST00000616865 IGLV3-32A0A0A0MS00 114 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 C17orf51A8MQB3 221 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 M0R3H8 397 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 AP3D1O14617 1153 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 ACOT8O14734 319 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 OIP5O43482 229 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 FRS3O43559 492 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 PRKD3O94806 890 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 LGI1O95970 557 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 GKN3PP0CG01 181 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 DPP4P27487 766 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 SKP2Q13309 424 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 CARM1Q86X55 608 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 WDSUB1Q8N9V3 476 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 NAXEQ8NCW5 288 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 GPR32P1Q8NGA4 272 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 OR52E4Q8NGH9 312 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 NEIL3Q8TAT5 605 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 GEMIN6Q8WXD5 167 aaKnown RBP13.4□□□□□ -0.26
UBXN1-218ENST00000616865 SLC35B4Q969S0 331 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 PYURFQ96I23 114 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 UGT2B28Q9BY64 529 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 GSX1Q9H4S2 264 aaPredicted RBP13.4□□□□□ -0.26
UBXN1-218ENST00000616865 ACKR4Q9NPB9 350 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 QPCTLQ9NXS2 382 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 SELENONQ9NZV5 590 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 FBXL2Q9UKC9 423 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 EDARQ9UNE0 448 aa13.4□□□□□ -0.26
UBXN1-218ENST00000616865 ANKHD1Q8IWZ3 2542 aaKnown RBP13.39□□□□□ -0.27
UBXN1-218ENST00000616865 NIPBLQ6KC79 2804 aaeCLIP13.39□□□□□ -0.27
UBXN1-218ENST00000616865 DVL2O14641 736 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 HK1P19367 917 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 BMP5P22003 454 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 TCEA1P23193 301 aaKnown RBP13.39□□□□□ -0.27
UBXN1-218ENST00000616865 GCKP35557 465 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 CRYBA2P53672 197 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 DSCR4P56555 118 aaPredicted RBP13.39□□□□□ -0.27
UBXN1-218ENST00000616865 GANABQ14697 944 aaKnown RBP13.39□□□□□ -0.27
UBXN1-218ENST00000616865 NRF1Q16656 503 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 FBXL19-AS1Q494R0 122 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 FAM98BQ52LJ0 330 aaKnown RBP13.39□□□□□ -0.27
UBXN1-218ENST00000616865 CBLN3Q6UW01 205 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 ENPP6Q6UWR7 440 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 PAMR1Q6UXH9 720 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 VTCN1Q7Z7D3 282 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 CADM2Q8N3J6 435 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 FADS6Q8N9I5 356 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 FAM71CQ8NEG0 241 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 OR14L1PQ8NHC6 308 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 FAM222BQ8WU58 562 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 TMEM234Q8WY98 164 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 RNASE6Q93091 150 aaKnown RBP13.39□□□□□ -0.27
UBXN1-218ENST00000616865 MBD6Q96DN6 1003 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 SLC47A1Q96FL8 570 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 LRRC46Q96FV0 321 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 SEPHS2Q99611 448 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 ARHGDIGQ99819 225 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 TAS2R10Q9NYW0 307 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 VDAC3Q9Y277 283 aa13.39□□□□□ -0.27
UBXN1-218ENST00000616865 RPH3AQ9Y2J0 694 aaPredicted RBP13.39□□□□□ -0.27
UBXN1-218ENST00000616865 NINQ8N4C6 2090 aa13.38□□□□□ -0.27
UBXN1-218ENST00000616865 A0A087WZY1 265 aa13.38□□□□□ -0.27
UBXN1-218ENST00000616865 AQP12BA6NM10 295 aa13.38□□□□□ -0.27
UBXN1-218ENST00000616865 BCAS1O75363 584 aaPredicted RBP13.38□□□□□ -0.27
UBXN1-218ENST00000616865 IFNW1P05000 195 aa13.38□□□□□ -0.27
UBXN1-218ENST00000616865 FOSL1P15407 271 aa13.38□□□□□ -0.27
UBXN1-218ENST00000616865 TNFRSF1BP20333 461 aa13.38□□□□□ -0.27
UBXN1-218ENST00000616865 PSMA4P25789 261 aaKnown RBP13.38□□□□□ -0.27
UBXN1-218ENST00000616865 SRD5A2P31213 254 aa13.38□□□□□ -0.27
UBXN1-218ENST00000616865 CEACAM8P31997 349 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms