RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 NDUFAF6Q330K2 333 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 PDCD4Q53EL6 469 aaKnown RBP10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 SYT14P1Q58G82 188 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 TMPPEQ6ZT21 453 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 BHLHA15Q7RTS1 189 aaPredicted RBP10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 GRINAQ7Z429 371 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 GALNT5Q7Z7M9 940 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 ZNF100Q8IYN0 542 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 ZNF619Q8N2I2 560 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 IGFBPL1Q8WX77 278 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 GTPBP3Q969Y2 492 aaKnown RBP10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 ROPN1LQ96C74 230 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 CCDC28BQ9BUN5 200 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 SAP130Q9H0E3 1048 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 EXOSC3Q9NQT5 275 aaKnown RBP10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 FAIMQ9NVQ4 179 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 PRDM4Q9UKN5 801 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 LIPT1Q9Y234 373 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 HDGFL3Q9Y3E1 203 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 ATRQ13535 2644 aa10.78□□□□□ -0.68
PDLIM2-218ENST00000614502 FBN1P35555 2871 aaKnown RBP10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 E9PBE3 544 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 GPR171O14626 319 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 FCMRO60667 390 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 PMS2P2O95744 297 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 PLAUP00749 431 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 PGM1P36871 562 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 RNF144AP50876 292 aaPredicted RBP10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 MAP2K6P52564 334 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 AQP5P55064 265 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 KCNJ10P78508 379 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 GNA13Q14344 377 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 TAB1Q15750 504 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 GPAT3Q53EU6 434 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 SPANXN4Q5MJ08 99 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 TIMM23BQ5SRD1 257 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 SAXO2Q658L1 398 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 TYW3Q6IPR3 259 aaKnown RBP10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 ALKBH2Q6NS38 261 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 DNAJC14Q6Y2X3 702 aaPredicted RBP10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 MTDHQ86UE4 582 aaKnown RBP10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 CMIPQ8IY22 773 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 GLB1L3Q8NCI6 653 aaPredicted RBP10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 FAM71CQ8NEG0 241 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 PIGXQ8TBF5 258 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 STON2Q8WXE9 905 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 PMM1Q92871 262 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 NEURL3Q96EH8 262 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 RADILQ96JH8 1075 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 EBF4Q9BQW3 602 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 SLC35A5Q9BS91 424 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 SERHL2Q9H4I8 314 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 TCF7L2Q9NQB0 619 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 SDR39U1Q9NRG7 319 aaPredicted RBP10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 CHRNA9Q9UGM1 479 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 BTNL2Q9UIR0 455 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 LAMP3Q9UQV4 416 aa10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 CHD3Q12873 2000 aaKnown RBP10.77□□□□□ -0.69
PDLIM2-218ENST00000614502 IGKV3D-15A0A087WSY6 115 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 IGHV3-15A0A0B4J1V0 119 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 A0A1W2PP18 115 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 ZNF814B7Z6K7 855 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 SMAD9O15198 467 aaKnown RBP10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 POLR3GO15318 223 aaPredicted RBP10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 CLOCKO15516 846 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 TFPIP10646 304 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 UQCRBP14927 111 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 GGT1P19440 569 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 IDUAP35475 653 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 MAGEA8P43361 318 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 MRPL19P49406 292 aaKnown RBP10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 NME5P56597 212 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 PPA1Q15181 289 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 FAM174BQ3ZCQ3 159 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 TNFAIP8L2Q6P589 184 aaPredicted RBP10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 CLEC4FQ8N1N0 589 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 CCDC115Q96NT0 180 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 ZBTB18Q99592 522 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 QRSL1Q9H0R6 528 aaKnown RBP10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 ALG2Q9H553 416 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 ZIM2Q9NZV7 527 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 KCNE5Q9UJ90 142 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 MGAT4BQ9UQ53 548 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 TRAPPC4Q9Y296 219 aa10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 NOSIPQ9Y314 301 aaKnown RBP10.76□□□□□ -0.69
PDLIM2-218ENST00000614502 INAFM1C9JVW0 142 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 EIF1BO60739 113 aaKnown RBP10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 SLC22A3O75751 556 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 PGM3O95394 542 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 H6PDO95479 791 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 PGRP06401 933 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 COX5AP20674 150 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 TSC22D1Q15714 1073 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 STK11Q15831 433 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 ZNF672Q499Z4 452 aaPredicted RBP10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 C1QTNF12Q5T7M4 302 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 FBXW9Q5XUX1 488 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 ABLIM2Q6H8Q1 611 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 FRRS1Q6ZNA5 592 aa10.75□□□□□ -0.69
PDLIM2-218ENST00000614502 ANKRD46Q86W74 232 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms