RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 OR2A4O95047 310 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 TCF15Q12870 199 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 PABPC1L2AQ5JQF8 200 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 PDZD9Q8IXQ8 264 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 KAT2AQ92830 837 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 OSTF1Q92882 214 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 TSACCQ96A04 125 aaPredicted RBP20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 ZC3H10Q96K80 434 aaKnown RBP20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 OR2A7Q96R45 310 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 USB1Q9BQ65 265 aaKnown RBP20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 YIPF4Q9BSR8 244 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 ABCG4Q9H172 646 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 PIPOXQ9P0Z9 390 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 FBXL3Q9UKT7 428 aa20.29■□□□□ 0.84
POLR2J3-220ENST00000613744 D6RAR5 112 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 SURF4O15260 269 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 SHC1P29353 583 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 S100A11P31949 105 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 PRLHRP49683 370 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 DGCR2P98153 550 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 HLXQ14774 488 aaPredicted RBP20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 ZSWIM7Q19AV6 140 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 PRAMEF14Q5SWL7 426 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 HIST2H2AA3Q6FI13 130 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 SMIM4Q8WVI0 70 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 FGF22Q9HCT0 170 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 TRIM36Q9NQ86 728 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 FSCN3Q9NQT6 498 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 P2RX2Q9UBL9 471 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 A0A1W2PR77 199 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 HMGN4O00479 90 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 PGRMC2O15173 223 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 VEGFDO43915 354 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 ECDO95905 644 aaPredicted RBP20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 CEACAM5P06731 702 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 ADRB1P08588 477 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 IL3P08700 152 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 H2AFB1P0C5Y9 115 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 IFNGR1P15260 489 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 TYRP1P17643 537 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 RABIFP47224 123 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 CAPZA2P47755 286 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 NFATC4Q14934 902 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 SYTL3Q4VX76 610 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 ZNF547Q8IVP9 402 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 LILRA3Q8N6C8 439 aaPredicted RBP20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 ELP4Q96EB1 424 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 DPH7Q9BTV6 452 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 DNTTIP1Q9H147 329 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 TM7SF3Q9NS93 570 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 MGAT4CQ9UBM8 478 aa20.28■□□□□ 0.84
POLR2J3-220ENST00000613744 OR2M5A3KFT3 312 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 ZNF749O43361 778 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 SIGLEC6O43699 453 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 PSMB1P20618 241 aaKnown RBP20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 TEAD1P28347 426 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 IMPA1P29218 277 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 STAT5AP42229 794 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 NUBP1P53384 320 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 TAS2R43P59537 309 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 TMPRSS11BQ86T26 416 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 STPG2Q8N412 459 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 EID2Q8N6I1 236 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 BMPERQ8N8U9 685 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 ANKRD19PQ9H560 264 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 INPP5EQ9NRR6 644 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 NLGN3Q9NZ94 848 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 PILRBQ9UKJ0 227 aa20.27■□□□□ 0.84
POLR2J3-220ENST00000613744 AQP8O94778 261 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 MT-ND4P03905 459 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 MAPK3P27361 379 aaPredicted RBP20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 CCR9P51686 369 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 AP3S2P59780 193 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 CXXC5Q7LFL8 322 aaKnown RBP20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 C6orf120Q7Z4R8 191 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 PXKQ7Z7A4 578 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 GID4Q8IVV7 300 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 ACBD7Q8N6N7 88 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 CAMKVQ8NCB2 501 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 OR51Q1Q8NH59 317 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 BBS10Q8TAM1 723 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 NEIL2Q969S2 332 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 TREX2Q9BQ50 279 aaPredicted RBP20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 WFDC6Q9BQY6 131 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 UTP23Q9BRU9 249 aaKnown RBP20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 MFRPQ9BY79 579 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 FAM86C1Q9NVL1 165 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 H2AFY2Q9P0M6 372 aaPredicted RBP20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 NDRG3Q9UGV2 375 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 CHST2Q9Y4C5 530 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 ARPC4-TTLL3A0A0A6YYG9 625 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 A0A1B0GVT2 93 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 SNRPGP15A8MWD9 76 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 M0R3H8 397 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 PLPP2O43688 288 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 RGS11O94810 467 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 IL5P05113 134 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 GABRA1P14867 456 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 ATP6V1E1P36543 226 aa20.26■□□□□ 0.83
POLR2J3-220ENST00000613744 PREPP48147 710 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms