RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 RPS26P11Q5JNZ5 115 aaPredicted RBP11.66□□□□□ -0.54
CTCFL-218ENST00000608440 SLC7A13Q8TCU3 470 aa11.66□□□□□ -0.54
CTCFL-218ENST00000608440 OCSTAMPQ9BR26 566 aa11.66□□□□□ -0.54
CTCFL-218ENST00000608440 ALG8Q9BVK2 526 aa11.66□□□□□ -0.54
CTCFL-218ENST00000608440 CHST5Q9GZS9 411 aa11.66□□□□□ -0.54
CTCFL-218ENST00000608440 SLITRK2Q9H156 845 aa11.66□□□□□ -0.54
CTCFL-218ENST00000608440 DUSP15Q9H1R2 295 aaPredicted RBP11.66□□□□□ -0.54
CTCFL-218ENST00000608440 HRH4Q9H3N8 390 aa11.66□□□□□ -0.54
CTCFL-218ENST00000608440 FAM124BQ9H5Z6 455 aaPredicted RBP11.66□□□□□ -0.54
CTCFL-218ENST00000608440 TMEM30AQ9NV96 361 aa11.66□□□□□ -0.54
CTCFL-218ENST00000608440 GAR1Q9NY12 217 aaKnown RBP11.66□□□□□ -0.54
CTCFL-218ENST00000608440 RCC2Q9P258 522 aaKnown RBP11.66□□□□□ -0.54
CTCFL-218ENST00000608440 ZDHHC8Q9ULC8 765 aa11.66□□□□□ -0.54
CTCFL-218ENST00000608440 CCDC88CQ9P219 2028 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 CASP8AP2Q9UKL3 1982 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 ARRDC5A6NEK1 342 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 OR2AT4A6NND4 320 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 IFNA2P01563 188 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 SFTA3P0C7M3 94 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 MC4RP32245 332 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 NDUFA6P56556 154 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 TNFRSF9Q07011 255 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 ODF4Q2M2E3 257 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 OR10K2Q6IF99 312 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 MSANTD1Q6ZTZ1 278 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 GLT6D1Q7Z4J2 308 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 C6orf120Q7Z4R8 191 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 LSRQ86X29 649 aaPredicted RBP11.65□□□□□ -0.54
CTCFL-218ENST00000608440 RASGEF1AQ8N9B8 481 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 OR13C5Q8NGS8 318 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 CMTM7Q96FZ5 175 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 SMARCD1Q96GM5 515 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 ZNF354BQ96LW1 612 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 TEAD3Q99594 435 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 GPA33Q99795 319 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 DUSP22Q9NRW4 184 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 FBXL21Q9UKT6 434 aa11.65□□□□□ -0.54
CTCFL-218ENST00000608440 A0A0D9SG52 128 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 TRAPPC13A5PLN9 417 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 AGPAT2O15120 278 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 C1GALT1C1LP0DN25 315 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 HNRNPKP61978 463 aaKnown RBP eCLIP11.65□□□□□ -0.55
CTCFL-218ENST00000608440 NAE1Q13564 534 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 TAF13Q15543 124 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 CPTPQ5TA50 214 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 C9orf57Q5W0N0 161 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 ADNP2Q6IQ32 1131 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 ZNF322Q6U7Q0 402 aaPredicted RBP11.65□□□□□ -0.55
CTCFL-218ENST00000608440 NPAS3Q8IXF0 933 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 ZNF296Q8WUU4 475 aaPredicted RBP11.65□□□□□ -0.55
CTCFL-218ENST00000608440 SLC22A18Q96BI1 424 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 WFDC6Q9BQY6 131 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 C20orf24Q9BUV8 137 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 CFHR5Q9BXR6 569 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 SIRT7Q9NRC8 400 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 OSER1Q9NX31 292 aa11.65□□□□□ -0.55
CTCFL-218ENST00000608440 BCL2L11O43521 198 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 TXNDC12O95881 172 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 IL5P05113 134 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 H1F0P07305 194 aaKnown RBP11.64□□□□□ -0.55
CTCFL-218ENST00000608440 GAAP10253 952 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 NSG1P42857 185 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 PIN1Q13526 163 aaPredicted RBP11.64□□□□□ -0.55
CTCFL-218ENST00000608440 PPP1R3BQ86XI6 285 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 CMTM4Q8IZR5 234 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 KCTD13Q8WZ19 329 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 ASB16Q96NS5 453 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 SMG9Q9H0W8 520 aaKnown RBP11.64□□□□□ -0.55
CTCFL-218ENST00000608440 NOD1Q9Y239 953 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 SLC27A6Q9Y2P4 619 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 SCN10AQ9Y5Y9 1956 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 CARNS1A5YM72 827 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 EMC8O43402 210 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 GSTZ1O43708 216 aaPredicted RBP11.64□□□□□ -0.55
CTCFL-218ENST00000608440 STK16O75716 305 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 MMP11P24347 488 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 ACVR1BP36896 505 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 CXADRP78310 365 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 MRPS10P82664 201 aaKnown RBP11.64□□□□□ -0.55
CTCFL-218ENST00000608440 CDC42EP1Q00587 391 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 PTSQ03393 145 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 HGFACQ04756 655 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 DCAF4L1Q3SXM0 396 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 AARDQ4LEZ3 155 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 ELFN2Q5R3F8 820 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 ARMC12Q5T9G4 340 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 ZDHHC20Q5W0Z9 365 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 FAM111BQ6SJ93 734 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 RNF165Q6ZSG1 346 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 ETFBKMTQ8IXQ9 262 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 BEST3Q8N1M1 668 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 KCNRGQ8N5I3 272 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 BBS1Q8NFJ9 593 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 OR8J2Q8NGG1 315 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 DUSP19Q8WTR2 217 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 FUBP3Q96I24 572 aaKnown RBP eCLIP11.64□□□□□ -0.55
CTCFL-218ENST00000608440 SLC35A5Q9BS91 424 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 NRSN2Q9GZP1 204 aa11.64□□□□□ -0.55
CTCFL-218ENST00000608440 TAS2R10Q9NYW0 307 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms