RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 PNMTP11086 282 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 GGT1P19440 569 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 CCNA2P20248 432 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 CHRNB4P30926 498 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 CRYBA2P53672 197 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 CSNK2A1P68400 391 aaPredicted RBP12.81□□□□□ -0.36
CTSA-219ENST00000607841 PON3Q15166 354 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 NRF1Q16656 503 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 CTU2Q2VPK5 515 aaKnown RBP12.81□□□□□ -0.36
CTSA-219ENST00000607841 EEF1A1P5Q5VTE0 462 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 GTF2IRD2BQ6EKJ0 949 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 GLYATQ6IB77 296 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 ULK3Q6PHR2 472 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 SEM1Q6ZVN7 128 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 GTF2IRD2Q86UP8 949 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 COMTD1Q86VU5 262 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 RNF148Q8N7C7 305 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 CPNE4Q96A23 557 aaPredicted RBP12.81□□□□□ -0.36
CTSA-219ENST00000607841 TPD52L3Q96J77 140 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 OR5B2Q96R09 309 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 MCHR1Q99705 422 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 GMPR2Q9P2T1 348 aaKnown RBP12.81□□□□□ -0.36
CTSA-219ENST00000607841 CLCF1Q9UBD9 225 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 CD300AQ9UGN4 299 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 EGFL7Q9UHF1 273 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 MAGEL2Q9UJ55 1249 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 RPS6KA6Q9UK32 745 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 PRPF19Q9UMS4 504 aaKnown RBP12.81□□□□□ -0.36
CTSA-219ENST00000607841 HDGFL3Q9Y3E1 203 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 TENM4Q6N022 2769 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 ZNF407Q9C0G0 2248 aa12.81□□□□□ -0.36
CTSA-219ENST00000607841 ZGRF1Q86YA3 2104 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 ASH1LQ9NR48 2969 aaKnown RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 UBR5O95071 2799 aaPredicted RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 ELOA3DA6NLF2 546 aaPredicted RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 M0R3H8 397 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 CXCL13O43927 109 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 RCBTB2O95199 551 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 SERPINA1P01009 418 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 TCN1P20061 433 aaPredicted RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 SHC1P29353 583 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 CEACAM8P31997 349 aaPredicted RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 RAC3P60763 192 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 OR1Q1Q15612 314 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 ELOA3BQ3SY89 546 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 ALG10BQ5I7T1 473 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 SWT1Q5T5J6 900 aaKnown RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 PPP4R4Q6NUP7 873 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 ZNF613Q6PF04 617 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 RINLQ6ZS11 566 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 TMPPEQ6ZT21 453 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 NCCRP1Q6ZVX7 275 aaPredicted RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 CBLL1Q75N03 491 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 C9orf106Q8NAJ2 232 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 ELOA3Q8NG57 546 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 OR6T1Q8NGN1 323 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 VANGL1Q8TAA9 524 aaPredicted RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 CA5BP1Q8WTZ4 195 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 ITLN2Q8WWU7 325 aaPredicted RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 C3orf49Q96BT1 292 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 SDCCAG3Q96C92 435 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 SLC47A1Q96FL8 570 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 ZNF845Q96IR2 970 aaPredicted RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 GORASP2Q9H8Y8 452 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 TAS2R1Q9NYW7 299 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 PACSIN3Q9UKS6 424 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 SAMD4AQ9UPU9 718 aaKnown RBP12.8□□□□□ -0.36
CTSA-219ENST00000607841 RNF6Q9Y252 685 aa12.8□□□□□ -0.36
CTSA-219ENST00000607841 A0A0G2JNJ9 132 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 A0A1B0GWA3 101 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 A0A1W2PNR3 127 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 TMEM72A0PK05 275 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 A8MVM7 634 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 SULT2B1O00204 365 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 GYG2O15488 501 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 ATP5HO75947 161 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 TOXO94900 526 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 ZNF682O95780 498 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 TGM6O95932 706 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 CRHP06850 196 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 NCK1P16333 377 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 CTSSP25774 331 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 HTR2AP28223 471 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 IFNA8P32881 189 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 RASSF2P50749 326 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 BNIP2Q12982 314 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 FXNQ16595 210 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 DNAL1Q4LDG9 190 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 ENTPD8Q5MY95 495 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 C6orf89Q6UWU4 347 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 FKBP9P1Q75LS8 142 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 ATG4DQ86TL0 474 aaPredicted RBP12.79□□□□□ -0.36
CTSA-219ENST00000607841 CARM1Q86X55 608 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 FAM156AQ8NDB6 213 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 FNDC9Q8TBE3 224 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 RNF217Q8TC41 542 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 STK35Q8TDR2 534 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 ZHX1-C8orf76Q96EF9 292 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 POTEKPQ9BYX7 375 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 POLR2J2Q9GZM3 115 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms