RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 TMEM185BQ9H7F4 350 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 GORASP2Q9H8Y8 452 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 TMEM27Q9HBJ8 222 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 TMED7Q9Y3B3 224 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 HDGFL3Q9Y3E1 203 aa12.47□□□□□ -0.41
RNF40-212ENST00000602784 NCOA6Q14686 2063 aaPredicted RBP12.46□□□□□ -0.41
RNF40-212ENST00000602784 HSPB2A8KAH6 182 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 TNFSF11O14788 317 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 TPST2O60704 377 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 ZG16O60844 167 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 OPN1LWP04000 364 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 PNMTP11086 282 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 FCGR2AP12318 317 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 CXCR1P25024 350 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 HTR2AP28223 471 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 SHC1P29353 583 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 SLC7A1P30825 629 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 EIF1AXP47813 144 aaKnown RBP12.46□□□□□ -0.41
RNF40-212ENST00000602784 RAC3P60763 192 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 BNIP1Q12981 228 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 CEACAM7Q14002 265 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 HSPB2Q16082 182 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 SGCBQ16585 318 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 SWT1Q5T5J6 900 aaKnown RBP12.46□□□□□ -0.41
RNF40-212ENST00000602784 GLYATQ6IB77 296 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 ZNF613Q6PF04 617 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 ULK3Q6PHR2 472 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 POMZP3Q6PJE2 187 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 CBLL1Q75N03 491 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 ATG4DQ86TL0 474 aaPredicted RBP12.46□□□□□ -0.41
RNF40-212ENST00000602784 ZNF808Q8N4W9 903 aaPredicted RBP12.46□□□□□ -0.41
RNF40-212ENST00000602784 RNF148Q8N7C7 305 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 ATP6V1C2Q8NEY4 427 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 OR6T1Q8NGN1 323 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 ITLN2Q8WWU7 325 aaPredicted RBP12.46□□□□□ -0.41
RNF40-212ENST00000602784 ASB5Q8WWX0 329 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 OSTF1Q92882 214 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 SLC38A4Q969I6 547 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 DDIT4LQ96D03 193 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 WFDC6Q9BQY6 131 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 POLR2J2Q9GZM3 115 aaKnown RBP12.46□□□□□ -0.41
RNF40-212ENST00000602784 POLR2J3Q9H1A7 115 aaKnown RBP12.46□□□□□ -0.41
RNF40-212ENST00000602784 COQ3Q9NZJ6 369 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 RPS6KB2Q9UBS0 482 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 MAGEL2Q9UJ55 1249 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 RPS6KA6Q9UK32 745 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 PRPF19Q9UMS4 504 aaKnown RBP12.46□□□□□ -0.41
RNF40-212ENST00000602784 TRAPPC4Q9Y296 219 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 SH3GLB1Q9Y371 365 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 ARHGAP21Q5T5U3 1957 aa12.46□□□□□ -0.41
RNF40-212ENST00000602784 USP9YO00507 2555 aaPredicted RBP12.45□□□□□ -0.42
RNF40-212ENST00000602784 A0A0B4J2E0 115 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 A0A0G2JNJ9 132 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 A0A1B0GWA3 101 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 A0A1B0GX12 115 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 SLC22A20A6NK97 555 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 KDM4EB2RXH2 506 aaPredicted RBP12.45□□□□□ -0.42
RNF40-212ENST00000602784 M0R3H8 397 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 DNPH1O43598 174 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 ATP5HO75947 161 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 TOXO94900 526 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 RCBTB2O95199 551 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 IL2RAP01589 272 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 CRHP06850 196 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 CHRNB4P30926 498 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 BNIP2Q12982 314 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 OR1Q1Q15612 314 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 NPTX1Q15818 432 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 EEF1A1P5Q5VTE0 462 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 OR2A2Q6IF42 318 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 TMPPEQ6ZT21 453 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 MRGPRGQ86SM5 289 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 FAM156AQ8NDB6 213 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 OR4D11Q8NGI4 311 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 OR10Q1Q8NGQ4 319 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 CPNE4Q96A23 557 aaPredicted RBP12.45□□□□□ -0.42
RNF40-212ENST00000602784 FAM162AQ96A26 154 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 SLC47A1Q96FL8 570 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 ZNF845Q96IR2 970 aaPredicted RBP12.45□□□□□ -0.42
RNF40-212ENST00000602784 OR5B2Q96R09 309 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 MCHR1Q99705 422 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 POTEKPQ9BYX7 375 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 COQ10BQ9H8M1 238 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 DCAF13Q9NV06 445 aaKnown RBP12.45□□□□□ -0.42
RNF40-212ENST00000602784 SELENONQ9NZV5 590 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 Q9UFV3 132 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 EGFL7Q9UHF1 273 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 MCTS1Q9ULC4 181 aaKnown RBP12.45□□□□□ -0.42
RNF40-212ENST00000602784 SNX13Q9Y5W8 968 aa12.45□□□□□ -0.42
RNF40-212ENST00000602784 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
RNF40-212ENST00000602784 TMEM72A0PK05 275 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 A8MVM7 634 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 CXCL13O43927 109 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 NPIPB7O75200 414 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 SYNGR4O95473 234 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 PMS2P2O95744 297 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 TGM6O95932 706 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 IL18BPO95998 194 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 SERPINA1P01009 418 aa12.44□□□□□ -0.42
RNF40-212ENST00000602784 TFPIP10646 304 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms