RNA–Protein interactions for RNA: ENST00000602253.5

ZNF546-209, Transcript of zinc finger protein 546, humanhuman

TSL 3

Gene ZNF546, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-209ENST00000602253 ZNF154Q13106 437 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 STX5Q13190 355 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 DHX34Q14147 1143 aaKnown RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 HERPUD1Q15011 391 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 EXOSC7Q15024 291 aaKnown RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 PRICKLE4Q2TBC4 344 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 C3orf36Q3SXR2 165 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 MMEL1Q495T6 779 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 CT45A2Q5DJT8 189 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 PAGE2BQ5JRK9 111 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 KHDRBS2Q5VWX1 349 aaKnown RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 IKBIPQ70UQ0 350 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 GAS2L3Q86XJ1 694 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 CNTN4Q8IWV2 1026 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 SAMD14Q8IZD0 417 aaPredicted RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 SYCE1Q8N0S2 351 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 ZCCHC7Q8N3Z6 543 aaKnown RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 STPG3Q8N7X2 389 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 SLC16A11Q8NCK7 471 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 C1orf162Q8NEQ5 155 aaPredicted RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 DEFB108BQ8NET1 73 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 ACTRT2Q8TDY3 377 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 ZNF473Q8WTR7 871 aaKnown RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 ZNF75CPQ92670 426 aaPredicted RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 KRT35Q92764 455 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 RAB8BQ92930 207 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 YIPF5Q969M3 257 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 ZNF669Q96BR6 464 aaPredicted RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 MFSD3Q96ES6 412 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 CMTM7Q96FZ5 175 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 SLC38A2Q96QD8 506 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 NAP1L3Q99457 506 aaPredicted RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 FAM118BQ9BPY3 351 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 CENPKQ9BS16 269 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 EFCAB11Q9BUY7 163 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 KIFC1Q9BW19 673 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 PACSIN1Q9BY11 444 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 SRXN1Q9BYN0 137 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 FRMD8P1Q9BZ68 369 aaPredicted RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 OSBPL8Q9BZF1 889 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 TPK1Q9H3S4 243 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 NHEJ1Q9H9Q4 299 aaPredicted RBP3.56□□□□□ -1.84
ZNF546-209ENST00000602253 TAS2R13Q9NYV9 303 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 PLLPQ9Y342 182 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 HYOU1Q9Y4L1 999 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 ASB4Q9Y574 426 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 LYSTQ99698 3801 aa3.56□□□□□ -1.84
ZNF546-209ENST00000602253 IGHV1-18A0A0C4DH31 117 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 A0A1W2PS29 197 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 AGAP5A6NIR3 686 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 MIF4GDA9UHW6 222 aaKnown RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 H0YL77 283 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 M0R233 179 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 SAP18O00422 153 aaKnown RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 CYTIPO60759 359 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 SH3BGRLO75368 114 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 RP2O75695 350 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 CYP7B1O75881 506 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 ZNF432O94892 652 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 WDR47O94967 919 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 IGHV3-9P01782 118 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 ITGA5P08648 1049 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 PPIAL4GP0DN37 164 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 NR2F6P10588 404 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 ZNF12P17014 697 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 ZNF20P17024 532 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 CDH2P19022 906 aaPredicted RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 PTPN7P35236 360 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 SFTPDP35247 375 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 MSX2P35548 267 aaPredicted RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 CETN2P41208 172 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 EIF1P41567 113 aaKnown RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 ZNF41P51814 821 aaPredicted RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 RAP1GDS1P52306 607 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 FOXG1P55316 489 aaPredicted RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 BPIFB3P59826 476 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 SLC25A3Q00325 362 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 CDKL1Q00532 357 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 TIAL1Q01085 375 aaKnown RBP eCLIP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 NAAAQ02083 359 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 HGFACQ04756 655 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 THOC5Q13769 683 aaKnown RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 TRIP13Q15645 432 aaPredicted RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 DEFB112Q30KQ8 113 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 TMEM176BQ3YBM2 270 aaPredicted RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 TRMT12Q53H54 448 aaKnown RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 OTUD3Q5T2D3 398 aaPredicted RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 OR52E8Q6IFG1 317 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 C11orf63Q6NUN7 778 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 KLHL24Q6TFL4 600 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 CYP20A1Q6UW02 462 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 Q6ZSV7 163 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 RNF144BQ7Z419 303 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 MARCH3Q86UD3 253 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 MTDHQ86UE4 582 aaKnown RBP3.55□□□□□ -1.84
ZNF546-209ENST00000602253 JAZF1Q86VZ6 243 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 CDK20Q8IZL9 346 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 PARP8Q8N3A8 854 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 KLHL36Q8N4N3 616 aa3.55□□□□□ -1.84
ZNF546-209ENST00000602253 WFDC9Q8NEX5 89 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms