RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 PCDHGA6Q9Y5G7 932 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 TMEM212A6NML5 194 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 CEBPZOSA8MTT3 80 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 CT45A6P0DMU7 189 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 CT45A5P0DMU8 189 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 CT45A7P0DMV0 189 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 CT45A8P0DMV1 189 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 CT45A9P0DMV2 189 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 ACPPP15309 386 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 PCBP2Q15366 365 aaKnown RBP eCLIP11.5□□□□□ -0.571e-6■■■■■ 34.6
SHANK2-218ENST00000601538 CT45A2Q5DJT8 189 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 CT45A1Q5HYN5 189 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 TMEM102Q8N9M5 508 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 OR5M3Q8NGP4 307 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 OR5M8Q8NGP6 311 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 CT45A3Q8NHU0 189 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 SORT1Q99523 831 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 EXOSC3Q9NQT5 275 aaKnown RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 SIDT1Q9NXL6 827 aaKnown RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 NWD2Q9ULI1 1742 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 ANKUB1A6NFN9 424 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 POM121CA8CG34 1229 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 ZNF891A8MT65 544 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 CSKP41240 450 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 DLX2Q07687 328 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 UGCGQ16739 394 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 APOBEC3HQ6NTF7 200 aaKnown RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 ALKAL2Q6UX46 152 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 ADIPOR1Q96A54 375 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 BABAM2Q9NXR7 383 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 HOXC11O43248 304 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 GPRIN2O60269 458 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 SLC2A1P11166 492 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 TNFSF8P32971 234 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 PDZK1IP1Q13113 114 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 TEX30Q5JUR7 227 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 ZNF648Q5T619 568 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 MS4A4EQ96PG1 132 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 PKMYT1Q99640 499 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 JTBO76095 146 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 SELENOWP63302 87 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 ZNF791Q3KP31 576 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 TIGD5Q53EQ6 642 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 LETMD1Q6P1Q0 360 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 TMEM135Q86UB9 458 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 REM2Q8IYK8 340 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 ARSGQ96EG1 525 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 INTS14Q96SY0 518 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 C1orf167Q5SNV9 1468 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 FOXD2O60548 495 aaPredicted RBP11.5□□□□□ -0.57
SHANK2-218ENST00000601538 AQP8O94778 261 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 MPC1LP0DKB6 136 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 PMPCAQ10713 525 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 SUMF1Q8NBK3 374 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 OR1J1Q8NGS3 322 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 PCED1AQ9H1Q7 454 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 FBRSQ9HAH7 460 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 BCO1Q9HAY6 547 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 SLC17A6Q9P2U8 582 aa11.5□□□□□ -0.57
SHANK2-218ENST00000601538 YJEFN3A6XGL0 299 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 WNT10BO00744 389 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 B4GALT2O60909 372 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 CST3P01034 146 aaPredicted RBP11.49□□□□□ -0.57
SHANK2-218ENST00000601538 IVDP26440 423 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 HNRNPA3P51991 378 aaKnown RBP11.49□□□□□ -0.57
SHANK2-218ENST00000601538 OR56B1Q8NGI3 324 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 TFAP2BQ92481 460 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 UBXN10Q96LJ8 280 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 EHFQ9NZC4 300 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 RASD1Q9Y272 281 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 PCDHA9Q9Y5H5 950 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 SVILO95425 2214 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 TCRBV7S3A2A0A539 114 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 ITGB5P18084 799 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 CAMK2BQ13554 666 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 FBXO22Q8NEZ5 403 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 NDRG1Q92597 394 aaKnown RBP11.49□□□□□ -0.57
SHANK2-218ENST00000601538 PRTFDC1Q9NRG1 225 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 ALPK2Q86TB3 2170 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 PTBP3O95758 552 aaKnown RBP11.49□□□□□ -0.57
SHANK2-218ENST00000601538 HPNP05981 417 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 SEC61A1P61619 476 aaKnown RBP11.49□□□□□ -0.57
SHANK2-218ENST00000601538 LCN10Q6JVE6 187 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 CGB2Q6NT52 195 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 OGFOD3Q6PK18 319 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 RNF111Q6ZNA4 994 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 CHRDL1Q9BU40 450 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 TLR9Q9NR96 1032 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 MYO7BQ6PIF6 2116 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 SNRPGP15A8MWD9 76 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 ARNTLO00327 626 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 OR2T1O43869 369 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 ACSM3Q53FZ2 586 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 TCTE1Q5JU00 501 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.49□□□□□ -0.57
SHANK2-218ENST00000601538 OR4N5Q8IXE1 308 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 OR1F2PQ96R84 312 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 OR2A25A4D2G3 310 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 TMEM235A6NFC5 223 aa11.49□□□□□ -0.57
SHANK2-218ENST00000601538 THBS1P07996 1170 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms