RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 PDSS1Q5T2R2 415 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 EEF1A1P5Q5VTE0 462 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 ABLIM2Q6H8Q1 611 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 NANOGP8Q6NSW7 305 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 PPP4R4Q6NUP7 873 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 TMPPEQ6ZT21 453 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 CALHM3Q86XJ0 350 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 TREML1Q86YW5 311 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 HIPK4Q8NE63 616 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 SLC35B4Q969S0 331 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 C3orf49Q96BT1 292 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 LRRC58Q96CX6 371 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 OR5B2Q96R09 309 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 NANOGQ9H9S0 305 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 CRIM1Q9NZV1 1036 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 TMED7Q9Y3B3 224 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 CAPN7Q9Y6W3 813 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 AKAP6Q13023 2319 aa14.05□□□□□ -0.16
RPS28-203ENST00000600659 SPG11Q96JI7 2443 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 TACC2O95359 2948 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 LOC100653049A0A140TA62 436 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 FAM221AA4D161 298 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 ZNF814B7Z6K7 855 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 C5orf58C9J3I9 102 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 DYNC1I1O14576 645 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 KRT34O76011 436 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 MFN2O95140 757 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 SYNGR4O95473 234 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 IMPDH2P12268 514 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 HTR2AP28223 471 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 AQP1P29972 269 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 SLC7A1P30825 629 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 PCYT1AP49585 367 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 POLR2HP52434 150 aaKnown RBP14.04□□□□□ -0.16
RPS28-203ENST00000600659 HOXC5Q00444 222 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 ZSWIM7Q19AV6 140 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 FCRLAQ7L513 359 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 SPATA21Q7Z572 469 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 POU5F2Q8N7G0 328 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 ZNF610Q8N9Z0 462 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 C11orf65Q8NCR3 313 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 OR6K3Q8NGY3 331 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 OR10A6Q8NH74 314 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 DNAJA3Q96EY1 480 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 ELAC2Q9BQ52 826 aaKnown RBP14.04□□□□□ -0.16
RPS28-203ENST00000600659 PSD2Q9BQI7 771 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 MYLK2Q9H1R3 596 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 PLSCR4Q9NRQ2 329 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 SERINC1Q9NRX5 453 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 USP22Q9UPT9 525 aa14.04□□□□□ -0.16
RPS28-203ENST00000600659 TMEM229AB2RXF0 380 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 ZNF208O43345 1280 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 SNX3O60493 162 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 TPST2O60704 377 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 CYTIPO60759 359 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 RAMP1O60894 148 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 SMNDC1O75940 238 aaKnown RBP eCLIP14.03□□□□□ -0.16
RPS28-203ENST00000600659 PMS2P2O95744 297 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 SLC6A2P23975 617 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 EDNRAP25101 427 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 SSTR2P30874 369 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 HTR3AP46098 478 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 TLE4Q04727 773 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 FAM27E3Q08E93 113 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 RBBP4Q09028 425 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 MYBPHQ13203 477 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 MAPRE2Q15555 327 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 CYP51A1Q16850 503 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 ZNF550Q7Z398 422 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 NUFIP2Q7Z417 695 aaKnown RBP14.03□□□□□ -0.16
RPS28-203ENST00000600659 ATG4DQ86TL0 474 aaPredicted RBP14.03□□□□□ -0.16
RPS28-203ENST00000600659 GPR32P1Q8NGA4 272 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 OR8J3Q8NGG0 315 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 RCN3Q96D15 328 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 PRRG4Q9BZD6 226 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 BCO1Q9HAY6 547 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 GLRX2Q9NS18 164 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 KLHL13Q9P2N7 655 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 ZNF232Q9UNY5 417 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 HDGFL3Q9Y3E1 203 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 AKAP9Q99996 3911 aa14.03□□□□□ -0.16
RPS28-203ENST00000600659 NPIPB7O75200 414 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 NPPAP01160 153 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 FESP07332 822 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 CCNA2P20248 432 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 PCGF2P35227 344 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 CPOXP36551 454 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 KIR2DL3P43628 341 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 CLK1P49759 484 aaKnown RBP14.02□□□□□ -0.17
RPS28-203ENST00000600659 CYLC2Q14093 348 aaPredicted RBP14.02□□□□□ -0.17
RPS28-203ENST00000600659 RNPS1Q15287 305 aaKnown RBP14.02□□□□□ -0.17
RPS28-203ENST00000600659 VMACQ2NL98 169 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 WBP2NLQ6ICG8 309 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 C8orf82Q6P1X6 216 aaPredicted RBP14.02□□□□□ -0.17
RPS28-203ENST00000600659 TUSC5Q8IXB3 177 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 LINC01560Q8TB33 94 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 TAMM41Q96BW9 452 aa14.02□□□□□ -0.17
RPS28-203ENST00000600659 ZNF300Q96RE9 604 aaPredicted RBP14.02□□□□□ -0.17
RPS28-203ENST00000600659 GPATCH1Q9BRR8 931 aaKnown RBP14.02□□□□□ -0.17
RPS28-203ENST00000600659 MCCC2Q9HCC0 563 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms