RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MAGEA2P43356 314 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 SRYQ05066 204 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 CHRNB3Q05901 458 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 C19orf57Q0VDD7 668 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 FOXD4Q12950 439 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 MRPL49Q13405 166 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 KPNB1Q14974 876 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 CTU2Q2VPK5 515 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 UBQLNLQ8IYU4 475 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 LILRA2Q8N149 483 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 OR5M9Q8NGP3 310 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 RNF217Q8TC41 542 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 SLC38A4Q969I6 547 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 SLCO4A1Q96BD0 722 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 OR11A1Q9GZK7 315 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 C12orf10Q9HB07 376 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 SERINC1Q9NRX5 453 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 PNPLA3Q9NST1 481 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 ACAD8Q9UKU7 415 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 SLC7A7Q9UM01 511 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 ZNF835Q9Y2P0 537 aa18.02■□□□□ 0.48
SHKBP1-222ENST00000600320 ZGRF1Q86YA3 2104 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 IGKV1D-42A0A075B6H8 117 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 A0A087WUJ7 227 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 ELOA3DA6NLF2 546 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 CHP2O43745 196 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 GPIP06744 558 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 UMPSP11172 480 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 CXCR1P25024 350 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 BCL2A1Q16548 175 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 ELOA3BQ3SY89 546 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 TMEM176BQ3YBM2 270 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 FAM98BQ52LJ0 330 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 EMC4Q5J8M3 183 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 C1QL3Q5VWW1 255 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 C3orf33Q6P1S2 294 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 LINC00114Q6XXX2 140 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 PIWIL3Q7Z3Z3 882 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 P3H2Q8IVL5 708 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 NKAIN4Q8IVV8 208 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 OFCC1Q8IZS5 231 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 PIK3C3Q8NEB9 887 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 ELOA3Q8NG57 546 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 FAM57AQ8TBR7 257 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 DNAJA3Q96EY1 480 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 RSRC1Q96IZ7 334 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 ADGRG7Q96K78 797 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 KLHL15Q96M94 604 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 POLR2J2Q9GZM3 115 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 PRDM14Q9GZV8 571 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 POLR2J3Q9H1A7 115 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 DENND2DQ9H6A0 471 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 COQ10BQ9H8M1 238 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 MAN2C1Q9NTJ4 1040 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 CAMK2AQ9UQM7 478 aa18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 SPENQ96T58 3664 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-222ENST00000600320 A0A1W2PNR3 127 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 BCKDKO14874 412 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 TPOP07202 933 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 CPN1P15169 458 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 ABOP16442 354 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 RHCEP18577 417 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 ACTR3P61158 418 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 EGR4Q05215 589 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 GXYLT1Q4G148 440 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 SYT14P1Q58G82 188 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 SWT1Q5T5J6 900 aaKnown RBP18■□□□□ 0.47
SHKBP1-222ENST00000600320 WLSQ5T9L3 541 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 ZNF605Q86T29 641 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 POP5Q969H6 163 aaKnown RBP18■□□□□ 0.47
SHKBP1-222ENST00000600320 ARL5BQ96KC2 179 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 CHID1Q9BWS9 393 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 SELENONQ9NZV5 590 aa18■□□□□ 0.47
SHKBP1-222ENST00000600320 FAM32AQ9Y421 112 aaKnown RBP18■□□□□ 0.47
SHKBP1-222ENST00000600320 GTF3C1Q12789 2109 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 EIF1AYO14602 144 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 TNFSF11O14788 317 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 ZNF208O43345 1280 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 SLC19A2O60779 497 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 RAP2AP10114 183 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 TFPIP10646 304 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 PNMTP11086 282 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 ITGA2P17301 1181 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 ST3GAL3Q11203 375 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 Q6ZPB1 254 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 CD163Q86VB7 1156 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 CYP4Z1Q86W10 505 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 PAPD5Q8NDF8 572 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 SLC25A43Q8WUT9 341 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 DHRS1Q96LJ7 313 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 PIP5K1AQ99755 562 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 FNDC11Q9BVV2 318 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 NMNAT1Q9HAN9 279 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 CCM2LQ9NUG4 571 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 TESMINQ9Y4I5 508 aa17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 SPIN1Q9Y657 262 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-222ENST00000600320 KDM4EB2RXH2 506 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 H0Y3Z8 333 aa17.98■□□□□ 0.47
SHKBP1-222ENST00000600320 ADAMDEC1O15204 470 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms