RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	DTX2	Q86UW9	622 aa		12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	FAM71C	Q8NEG0	241 aa		12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	TOR1AIP2	Q8NFQ8	470 aa		12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	DUSP26	Q9BV47	211 aa		12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	BHLHE41	Q9C0J9	482 aa	Predicted RBP	12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	ZNF350	Q9GZX5	532 aa		12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	EML4	Q9HC35	981 aa	Known RBP	12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	SLCO1B3	Q9NPD5	702 aa		12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	NGB	Q9NPG2	151 aa		12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	ATAD3A	Q9NVI7	634 aa		12.96	□□□□□ -0.33
IRF3-223	ENST00000599223	MKLN1	Q9UL63	735 aa		12.96	□□□□□ -0.33
IRF3-223	ENST00000599223		A0A096LNT2	108 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	ABCD4	O14678	606 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	EIF4E2	O60573	245 aa	Known RBP	12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	SNN	O75324	88 aa	Predicted RBP	12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	CYP7B1	O75881	506 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	UBTFL6	P0CB48	400 aa	Predicted RBP	12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	PRPS1L1	P21108	318 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	NTF4	P34130	210 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	LSM12	Q3MHD2	195 aa	Known RBP	12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	SYT14P1	Q58G82	188 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	OR4F3	Q6IEY1	312 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	B3GLCT	Q6Y288	498 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	MOAP1	Q96BY2	351 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	TUBGCP3	Q96CW5	907 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	TRMT61A	Q96FX7	289 aa	Known RBP	12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	SLC35G5	Q96KT7	338 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	LAT2	Q9GZY6	243 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	NPHS2	Q9NP85	383 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	USH1C	Q9Y6N9	552 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	SVEP1	Q4LDE5	3571 aa		12.95	□□□□□ -0.34
IRF3-223	ENST00000599223	IGHV4-30-2	A0A087WSY4	118 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	GOLGA8Q	A0A0J9YX86	632 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	GOLGA8O	A6NCC3	632 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	ZNF716	A6NP11	495 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	ZNF724	A8MTY0	619 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	GOLGA8N	F8WBI6	632 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	KIAA0513	O60268	411 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	RAD51D	O75771	328 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	DCTN3	O75935	186 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	CSTA	P01040	98 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	IDUA	P35475	653 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	PGM1	P36871	562 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	FOXG1	P55316	489 aa	Predicted RBP	12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	MERTK	Q12866	999 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	PGS1	Q32NB8	556 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	C6orf120	Q7Z4R8	191 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	ANKRD46	Q86W74	232 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	ZNF433	Q8N7K0	673 aa	Predicted RBP	12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	ST8SIA1	Q92185	356 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	PPP1R36	Q96LQ0	422 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	REPIN1	Q9BWE0	567 aa	Known RBP	12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	OR51I1	Q9H343	314 aa		12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	CISD1	Q9NZ45	108 aa	Known RBP	12.94	□□□□□ -0.34
IRF3-223	ENST00000599223	IGKV3D-15	A0A087WSY6	115 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223		A0A1W2PR80	420 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	OR5H1	A6NKK0	313 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	CLDN24	A6NM45	220 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	SLCO1B7	G3V0H7	640 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	ITM2A	O43736	263 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	CD5L	O43866	347 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	STX11	O75558	287 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	PGM3	O95394	542 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	GGT1	P19440	569 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	MATN1	P21941	496 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	ARFIP2	P53365	341 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	CLDN8	P56748	225 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	IRX1	P78414	480 aa	Predicted RBP	12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	PDCD2	Q16342	344 aa	Predicted RBP	12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	ARHGAP11B	Q3KRB8	267 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	GLIPR1L2	Q4G1C9	344 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	TIMM23B	Q5SRD1	257 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	TYW3	Q6IPR3	259 aa	Known RBP	12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	C11orf71	Q6IPW1	123 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	TMPPE	Q6ZT21	453 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	CCDC121	Q6ZUS5	278 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	GALNT5	Q7Z7M9	940 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	SPATA3	Q8NHX4	192 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	HTRA1	Q92743	480 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	RAB8B	Q92930	207 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	ARL5B	Q96KC2	179 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	CCDC106	Q9BWC9	280 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	OR11A1	Q9GZK7	315 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	ACER3	Q9NUN7	267 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	ASIC5	Q9NY37	505 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	B3GALT5	Q9Y2C3	310 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	ARFGEF3	Q5TH69	2177 aa		12.93	□□□□□ -0.34
IRF3-223	ENST00000599223	HEATR1	Q9H583	2144 aa	Known RBP	12.92	□□□□□ -0.34
IRF3-223	ENST00000599223		A0A0G2JND7	137 aa		12.92	□□□□□ -0.34
IRF3-223	ENST00000599223	PRAMEF27	A3QJZ7	478 aa		12.92	□□□□□ -0.34
IRF3-223	ENST00000599223		E7EQL1	145 aa		12.92	□□□□□ -0.34
IRF3-223	ENST00000599223	SULT2B1	O00204	365 aa		12.92	□□□□□ -0.34
IRF3-223	ENST00000599223	GPRIN2	O60269	458 aa		12.92	□□□□□ -0.34
IRF3-223	ENST00000599223	SCN2B	O60939	215 aa		12.92	□□□□□ -0.34
IRF3-223	ENST00000599223	PHC1	P78364	1004 aa		12.92	□□□□□ -0.34
IRF3-223	ENST00000599223	SF3A3	Q12874	501 aa	Known RBP eCLIP	12.92	□□□□□ -0.34	1e-6	■■■■□ 19.4
IRF3-223	ENST00000599223	FRRS1	Q6ZNA5	592 aa		12.92	□□□□□ -0.34

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