RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 FAM122AQ96E09 287 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 GFM1Q96RP9 751 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 CTRCQ99895 268 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 CORINQ9Y5Q5 1042 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 IGKV1D-42A0A075B6H8 117 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 GPX5O75715 221 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 MYL12AP19105 171 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 ABCD3P28288 659 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 IL12BP29460 328 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 UGT2B10P36537 528 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 PLCXD2Q0VAA5 305 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 ANKDD1AQ495B1 522 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 ADCK1Q86TW2 530 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 PPP1R3BQ86XI6 285 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 OIT3Q8WWZ8 545 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 PTP4A1Q93096 173 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 NACC2Q96BF6 587 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 OMA1Q96E52 524 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 DTNBP1Q96EV8 351 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 AKIRIN1Q9H9L7 192 aaPredicted RBP15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 EXOSC3Q9NQT5 275 aaKnown RBP15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 CMC2Q9NRP2 79 aa15.58■□□□□ 0.09
SHKBP1-216ENST00000598201 IRGMA1A4Y4 181 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 HEXBP07686 556 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 TMEM44Q2T9K0 475 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 ZNF829Q3KNS6 432 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 WBP2NLQ6ICG8 309 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 NIPAL3Q6P499 406 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 C16orf47Q6ZP98 133 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 USP43Q70EL4 1123 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 OVCH1Q7RTY7 1134 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 MARCH3Q86UD3 253 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 LHFPL3Q86UP9 236 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 TM9SF4Q92544 642 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 SGTBQ96EQ0 304 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 SH3YL1Q96HL8 342 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 FN3KQ9H479 309 aa15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 H2AFY2Q9P0M6 372 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 EXOGQ9Y2C4 368 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-216ENST00000598201 OR6C76A6NM76 312 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 D6RAR5 112 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 J3QRK9 145 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 GMFGO60234 142 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 ENDOUP21128 410 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 SLC9A3P48764 834 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 ZNF117Q03924 483 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 MLLT11Q13015 90 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 C1DQ13901 141 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 LIPKQ5VXJ0 399 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 RTL4Q6ZR62 310 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 ATG4DQ86TL0 474 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 SIRT6Q8N6T7 355 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 APCDD1LQ8NCL9 501 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 NFAM1Q8NET5 270 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 GATAD2BQ8WXI9 593 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 VMP1Q96GC9 406 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 ZNF649Q9BS31 505 aa15.57■□□□□ 0.08
SHKBP1-216ENST00000598201 TMEM129A0AVI4 362 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 NTN3O00634 580 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 ALOX12BO75342 701 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 NOS3P29474 1203 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 WNT4P56705 351 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 RNF4P78317 190 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 GXYLT1Q4G148 440 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 IGFN1Q86VF2 1251 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 PHC2Q8IXK0 858 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 SLC37A3Q8NCC5 494 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 B4GALNT2Q8NHY0 566 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 TRMT61AQ96FX7 289 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 RACGAP1Q9H0H5 632 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 EXOSC1Q9Y3B2 195 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 VSTM2BA6NLU5 285 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 CBFA2T3O75081 653 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 LDOC1O95751 146 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 ONECUT2O95948 504 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 SLC6A6P31641 620 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 PLA2G5P39877 138 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 SLC1A3P43003 542 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 TUBA1BP68363 451 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 ITGADQ13349 1161 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 TUBA1AQ71U36 451 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 MEPCEQ7L2J0 689 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 CYB561A3Q8NBI2 242 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 ZNF485Q8NCK3 441 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 OR5M3Q8NGP4 307 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 KISS1RQ969F8 398 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 HSPBAP1Q96EW2 488 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 SEMA4CQ9C0C4 833 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 LAT2Q9GZY6 243 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 NDUFB11Q9NX14 153 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 FBXL4Q9UKA2 621 aa15.56■□□□□ 0.08
SHKBP1-216ENST00000598201 SAGE2PA6NJ88 616 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 ELOA3DA6NLF2 546 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 ALG1L2C9J202 215 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 MCIDASD6RGH6 385 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 J3QRE1 110 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 HCRTR2O43614 444 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 ZNF354AO60765 605 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 IGHA1P01876 353 aa15.55■□□□□ 0.08
SHKBP1-216ENST00000598201 CLUP10909 449 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms