RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RNF144AP50876 292 aaPredicted RBP14.99□□□□□ -0.01
PNKP-210ENST00000597965 FABP6P51161 128 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 HBA1P69905 142 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 VLDLRP98155 873 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 TGFBR3Q03167 851 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 TMEM249Q2WGJ8 235 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 ELOA3BQ3SY89 546 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 HSP90B2PQ58FF3 399 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 ABLIM2Q6H8Q1 611 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 VPS37AQ8NEZ2 397 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 ELOA3Q8NG57 546 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 OR5D16Q8NGK9 328 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 OR5AK3PQ8NH89 298 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 FAM168AQ92567 244 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 PROX1Q92786 737 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 ZNF775Q96BV0 537 aaPredicted RBP14.99□□□□□ -0.01
PNKP-210ENST00000597965 TUBGCP3Q96CW5 907 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 KCNK17Q96T54 332 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 INPP5KQ9BT40 448 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 C1orf50Q9BV19 199 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 BEX2Q9BXY8 128 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 NPAP1Q9NZP6 1156 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 MALT1Q9UDY8 824 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 CHRNA9Q9UGM1 479 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 PMF1-BGLAPU3KQ54 211 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 PLCE1Q9P212 2302 aa14.99□□□□□ -0.01
PNKP-210ENST00000597965 IGHV4-30-2A0A087WSY4 118 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 UGT2B17O75795 530 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 ALDH3A1P30838 453 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 MAGEA8P43361 318 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 HTR3AP46098 478 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 SLC16A1P53985 500 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 CASP9P55211 416 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 IRX1P78414 480 aaPredicted RBP14.98□□□□□ -0.01
PNKP-210ENST00000597965 CHRNEQ04844 493 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 SMU1Q2TAY7 513 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 CYB5R2Q6BCY4 276 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 C11orf71Q6IPW1 123 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 GRINAQ7Z429 371 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 C6orf120Q7Z4R8 191 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 PHC2Q8IXK0 858 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 RIMKLAQ8IXN7 391 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 RIBC1Q8N443 379 aaPredicted RBP14.98□□□□□ -0.01
PNKP-210ENST00000597965 C17orf78Q8N4C9 275 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 OR52N5Q8NH56 324 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 AGR3Q8TD06 166 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 EPS8L3Q8TE67 593 aaKnown RBP14.98□□□□□ -0.01
PNKP-210ENST00000597965 SLC35G5Q96KT7 338 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 MUS81Q96NY9 551 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 AMBRA1Q9C0C7 1298 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 ZNF350Q9GZX5 532 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 QRSL1Q9H0R6 528 aaKnown RBP14.98□□□□□ -0.01
PNKP-210ENST00000597965 NOP53Q9NZM5 478 aaKnown RBP14.98□□□□□ -0.01
PNKP-210ENST00000597965 MKLN1Q9UL63 735 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 SLC25A15Q9Y619 301 aa14.98□□□□□ -0.01
PNKP-210ENST00000597965 RNF103-CHMP3A0A140T963 221 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 E7EQL1 145 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 RNASET2O00584 256 aaKnown RBP14.97□□□□□ -0.01
PNKP-210ENST00000597965 EIF1BO60739 113 aaKnown RBP14.97□□□□□ -0.01
PNKP-210ENST00000597965 PAX7P23759 505 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 THBS2P35442 1172 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 ZNF83P51522 516 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 MAP2K6P52564 334 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 CLDN8P56748 225 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 HPCAP84074 193 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 PGS1Q32NB8 556 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 KRTCAP2Q8N6L1 136 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 C1orf162Q8NEQ5 155 aaPredicted RBP14.97□□□□□ -0.01
PNKP-210ENST00000597965 MIPOL1Q8TD10 442 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 NANOS1Q8WY41 292 aaKnown RBP14.97□□□□□ -0.01
PNKP-210ENST00000597965 TMEM109Q9BVC6 243 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 CCDC106Q9BWC9 280 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 TMBIM4Q9HC24 238 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 EXOSC3Q9NQT5 275 aaKnown RBP14.97□□□□□ -0.01
PNKP-210ENST00000597965 UPB1Q9UBR1 384 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 TRAPPC4Q9Y296 219 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 AMDHD2Q9Y303 409 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 WDR45Q9Y484 360 aa14.97□□□□□ -0.01
PNKP-210ENST00000597965 ZNF716A6NP11 495 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 M0R1B8 84 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 POLR3GO15318 223 aaPredicted RBP14.96□□□□□ -0.01
PNKP-210ENST00000597965 PHF1O43189 567 aaPredicted RBP14.96□□□□□ -0.01
PNKP-210ENST00000597965 FCMRO60667 390 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 F12P00748 615 aaPredicted RBP14.96□□□□□ -0.01
PNKP-210ENST00000597965 IGHV3-9P01782 118 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 UQCRBP14927 111 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 PGM1P36871 562 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 EFNA4P52798 201 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 EMX2Q04743 252 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 CEP85LQ5SZL2 805 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 AP1ARQ63HQ0 302 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 FAM71CQ8NEG0 241 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 PMM1Q92871 262 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 DDIT4LQ96D03 193 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 NAA11Q9BSU3 229 aaPredicted RBP14.96□□□□□ -0.01
PNKP-210ENST00000597965 SHARPINQ9H0F6 387 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 ASIC5Q9NY37 505 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 TMEM181Q9P2C4 612 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 DCTN4Q9UJW0 460 aa14.96□□□□□ -0.01
PNKP-210ENST00000597965 SLC9A8Q9Y2E8 581 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms