RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 GKAP1Q5VSY0 366 aaPredicted RBP9.94□□□□□ -0.82
LIG1-211ENST00000596457 ZNF787Q6DD87 383 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 WBP2NLQ6ICG8 309 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 DHRS4L2Q6PKH6 230 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 NET1Q7Z628 596 aaPredicted RBP9.94□□□□□ -0.82
LIG1-211ENST00000596457 LUZP2Q86TE4 346 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 ADGRG3Q86Y34 549 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 SLC30A8Q8IWU4 369 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 ADGRG7Q96K78 797 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 ZNF583Q96ND8 569 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 LRRC37BQ96QE4 947 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 UCN2Q96RP3 112 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 PRR14Q9BWN1 585 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 RSPO3Q9BXY4 272 aaPredicted RBP9.94□□□□□ -0.82
LIG1-211ENST00000596457 SRXN1Q9BYN0 137 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 OR11A1Q9GZK7 315 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 CMTM6Q9NX76 183 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 KLHL28Q9NXS3 571 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 GMPR2Q9P2T1 348 aaKnown RBP9.94□□□□□ -0.82
LIG1-211ENST00000596457 CHRNA9Q9UGM1 479 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 OSGIN1Q9UJX0 560 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 SPIN1Q9Y657 262 aaPredicted RBP9.94□□□□□ -0.82
LIG1-211ENST00000596457 OTOGQ6ZRI0 2925 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 MED12LQ86YW9 2145 aa9.94□□□□□ -0.82
LIG1-211ENST00000596457 ZFHX3Q15911 3703 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 SULT2B1O00204 365 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 ADAMDEC1O15204 470 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 GSTA4O15217 222 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 GCM2O75603 506 aaPredicted RBP9.93□□□□□ -0.82
LIG1-211ENST00000596457 SMNDC1O75940 238 aaKnown RBP eCLIP9.93□□□□□ -0.821e-10■■■□□ 14.8
LIG1-211ENST00000596457 MFN2O95140 757 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 FAM107AO95990 144 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 PRDX6P30041 224 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 UQCRC1P31930 480 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 OPRM1P35372 400 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 SLC7A2P52569 658 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 CTBP2P56545 445 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 RGS8P57771 180 aaPredicted RBP9.93□□□□□ -0.82
LIG1-211ENST00000596457 OR2B6P58173 313 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 PSME3P61289 254 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 NCALDP61601 193 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 MXRA7P84157 204 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 SLC25A35Q3KQZ1 300 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 SYT14P1Q58G82 188 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 OR2A2Q6IF42 318 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 VWA1Q6PCB0 445 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 PATL1Q86TB9 770 aaKnown RBP9.93□□□□□ -0.82
LIG1-211ENST00000596457 COMTD1Q86VU5 262 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 CALHM3Q86XJ0 350 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 MICU2Q8IYU8 434 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 RELL2Q8NC24 303 aaPredicted RBP9.93□□□□□ -0.82
LIG1-211ENST00000596457 CCDC197Q8NCU1 140 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 OR2T12Q8NG77 320 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 OR52E4Q8NGH9 312 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 VANGL1Q8TAA9 524 aaPredicted RBP9.93□□□□□ -0.82
LIG1-211ENST00000596457 DDIT4LQ96D03 193 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 ZFP3Q96NJ6 502 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 HOPXQ9BPY8 73 aaPredicted RBP9.93□□□□□ -0.82
LIG1-211ENST00000596457 COQ10BQ9H8M1 238 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 ARL8BQ9NVJ2 186 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 PAQR5Q9NXK6 330 aaPredicted RBP9.93□□□□□ -0.82
LIG1-211ENST00000596457 ZNF629Q9UEG4 869 aaPredicted RBP9.93□□□□□ -0.82
LIG1-211ENST00000596457 ZNF175Q9Y473 711 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 F8P00451 2351 aa9.93□□□□□ -0.82
LIG1-211ENST00000596457 A0A1W2PNV4 684 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ELOVL7A1L3X0 281 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 FAM220BPB1ANY3 271 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 M0R3H8 397 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ETV2O00321 342 aaPredicted RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 FAAHO00519 579 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 FCGR2AP12318 317 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 COX6B1P14854 86 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ENPP1P22413 925 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 DIO1P49895 249 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ASCL1P50553 236 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 PCBP3P57721 371 aaKnown RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 LIPEQ05469 1076 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 FOXD4Q12950 439 aaPredicted RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 ZNF239Q16600 458 aaKnown RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 DUSP7Q16829 419 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 LRRC23Q53EV4 343 aaPredicted RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 GTF2IRD2BQ6EKJ0 949 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ERICH5Q6P6B1 374 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 MEX3BQ6ZN04 569 aaKnown RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 FCRLAQ7L513 359 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ARPINQ7Z6K5 226 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 GTF2IRD2Q86UP8 949 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 SLC15A3Q8IY34 581 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 BHLHE22Q8NFJ8 381 aaPredicted RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 SLC25A43Q8WUT9 341 aaPredicted RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 CPNE4Q96A23 557 aaPredicted RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 MARVELD3Q96A59 401 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ZNF775Q96BV0 537 aaPredicted RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 LRRC46Q96FV0 321 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ARL5BQ96KC2 179 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 WFDC6Q9BQY6 131 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 GPATCH1Q9BRR8 931 aaKnown RBP9.92□□□□□ -0.82
LIG1-211ENST00000596457 SFXN3Q9BWM7 321 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 ADAM19Q9H013 955 aa9.92□□□□□ -0.82
LIG1-211ENST00000596457 TMEM27Q9HBJ8 222 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms