RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 FTCDNL1E5RQL4 147 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 GSTA4O15217 222 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 LRRTM2O43300 516 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 ZNF208O43345 1280 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 TPOP07202 933 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 GLI4P10075 376 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 ABOP16442 354 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 POU3F2P20265 443 aaPredicted RBP9.48□□□□□ -0.89
LIG1-210ENST00000596332 ACVR2AP27037 513 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 CEACAM8P31997 349 aaPredicted RBP9.48□□□□□ -0.89
LIG1-210ENST00000596332 P2RY4P51582 365 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 POLR2HP52434 150 aaKnown RBP9.48□□□□□ -0.89
LIG1-210ENST00000596332 H3F3AP84243 136 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 SRYQ05066 204 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 SELENBP1Q13228 472 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 GUSBP1Q15486 140 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 ZNF585AQ6P3V2 769 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 AAGABQ6PD74 315 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 ZNF613Q6PF04 617 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 NHLRC1Q6VVB1 395 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 RPTNQ6XPR3 784 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 GDF7Q7Z4P5 450 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 NKAIN4Q8IVV8 208 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 EID3Q8N140 333 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 CADM2Q8N3J6 435 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 NAXEQ8NCW5 288 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 TNIP2Q8NFZ5 429 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 PRR7Q8TB68 274 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 SLC26A7Q8TE54 656 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 ADAMTS16Q8TE57 1224 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 FAM162AQ96A26 154 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 SLCO4A1Q96BD0 722 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 MS4A3Q96HJ5 214 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 TPD52L3Q96J77 140 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 KLHL15Q96M94 604 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 TTYH2Q9BSA4 534 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 ARMC7Q9H6L4 198 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 C12orf10Q9HB07 376 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 CAMK2AQ9UQM7 478 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 HIVEP3Q5T1R4 2406 aa9.48□□□□□ -0.89
LIG1-210ENST00000596332 TCRBV3S1A0A5B6 114 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 MBD3L4A6NDZ8 208 aaPredicted RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 MBD3L3A6NE82 208 aaPredicted RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 MBD3L5A6NJ08 208 aaPredicted RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 CD8B2A6NJW9 211 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 CPSF4LA6NMK7 179 aaKnown RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 CLCA1A8K7I4 914 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 E9PLN8 166 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 J3QKU1 62 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 EBAG9O00559 213 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 TNFSF11O14788 317 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 CXCL13O43927 109 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 RAMP1O60894 148 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 WDR1O75083 606 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 AQP8O94778 261 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 ZNF682O95780 498 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 IFNA14P01570 189 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 CCNA2P20248 432 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 NTF4P34130 210 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 SFTPDP35247 375 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 MAGEA2P43356 314 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 HTR3AP46098 478 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 YAP1P46937 504 aaKnown RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 NUP107P57740 925 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.47□□□□□ -0.89
LIG1-210ENST00000596332 IFI44LQ53G44 452 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 SYT14P1Q58G82 188 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 WLSQ5T9L3 541 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 NSUN5P2Q63ZY6 315 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 ULK3Q6PHR2 472 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 TMPPEQ6ZT21 453 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 ESPNLQ6ZVH7 1005 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 PIWIL3Q7Z3Z3 882 aaKnown RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 LIX1LQ8IVB5 337 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 P3H2Q8IVL5 708 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 UBQLNLQ8IYU4 475 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 ADGRG5Q8IZF4 528 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 C9orf106Q8NAJ2 232 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 ATP6V1C2Q8NEY4 427 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 OR10D3Q8NH80 312 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 OR2V1Q8NHB1 315 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 MBD3L2Q8NHZ7 208 aaPredicted RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 PROX1Q92786 737 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 OSTF1Q92882 214 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 TAAR8Q969N4 342 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 KTI12Q96EK9 354 aaPredicted RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 DNAJA3Q96EY1 480 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 DHRS1Q96LJ7 313 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 NSMCE2Q96MF7 247 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 ZNF300Q96RE9 604 aaPredicted RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 VKORC1Q9BQB6 163 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 POTEKPQ9BYX7 375 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 MUC13Q9H3R2 512 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 EXO5Q9H790 373 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 CALHM2Q9HA72 323 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 MEPEQ9NQ76 525 aaPredicted RBP9.47□□□□□ -0.89
LIG1-210ENST00000596332 ADPRHL2Q9NX46 363 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 KLHL28Q9NXS3 571 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 RIMS3Q9UJD0 308 aa9.47□□□□□ -0.89
LIG1-210ENST00000596332 ENPP4Q9Y6X5 453 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms