RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ADAM19Q9H013 955 aa9.8□□□□□ -0.84
SHKBP1-206ENST00000595523 TMEM38AQ9H6F2 299 aa9.8□□□□□ -0.84
SHKBP1-206ENST00000595523 PLSCR4Q9NRQ2 329 aa9.8□□□□□ -0.84
SHKBP1-206ENST00000595523 OSGIN1Q9UJX0 560 aa9.8□□□□□ -0.84
SHKBP1-206ENST00000595523 CORO2BQ9UQ03 480 aa9.8□□□□□ -0.84
SHKBP1-206ENST00000595523 CADP27708 2225 aa9.8□□□□□ -0.84
SHKBP1-206ENST00000595523 RAI1Q7Z5J4 1906 aaPredicted RBP9.8□□□□□ -0.84
SHKBP1-206ENST00000595523 TMED7-TICAM2A0A0A6YYA0 188 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TMEM72A0PK05 275 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 ZC3H12DA2A288 527 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TMEM247A6NEH6 219 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TUBAL3A6NHL2 446 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TPST1O60507 370 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 GCM2O75603 506 aaPredicted RBP9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 CTAG2O75638 210 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 PLGP00747 810 aaPredicted RBP9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 FESP07332 822 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 ETS2P15036 469 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 CCNA2P20248 432 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TACR3P29371 465 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 PEX19P40855 299 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 PCYT1AP49585 367 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 GZMMP51124 257 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 POLR2HP52434 150 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 PCBP3P57721 371 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 HOXC5Q00444 222 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 SCARB2Q14108 478 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TRMT5Q32P41 509 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 GLIPR1L2Q4G1C9 344 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 ZNF311Q5JNZ3 666 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TMPPEQ6ZT21 453 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 FCRLAQ7L513 359 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 NUFIP2Q7Z417 695 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 NET1Q7Z628 596 aaPredicted RBP9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TUSC5Q8IXB3 177 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 ZNF440Q8IYI8 595 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 FAM222BQ8WU58 562 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 PSD2Q9BQI7 771 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 SLC39A3Q9BRY0 314 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 KAT8Q9H7Z6 458 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 SLC24A3Q9HC58 644 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TIGARQ9NQ88 270 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 SERINC1Q9NRX5 453 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 GLRX2Q9NS18 164 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 KLHL13Q9P2N7 655 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 PROCRQ9UNN8 238 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 IFT52Q9Y366 437 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 TMED7Q9Y3B3 224 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 EMC9Q9Y3B6 208 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 ALPK2Q86TB3 2170 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 F8P00451 2351 aa9.79□□□□□ -0.84
SHKBP1-206ENST00000595523 A6NNC1 897 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 EVPLLA8MZ36 301 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 ZNF814B7Z6K7 855 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 C5orf58C9J3I9 102 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 SULT2B1O00204 365 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 CYTIPO60759 359 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 RAMP1O60894 148 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 PMS2P2O95744 297 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 TFPIP10646 304 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 IMPDH2P12268 514 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 EDNRAP25101 427 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 AQP1P29972 269 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 PRKAR1BP31321 381 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 UGT2B10P36537 528 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 CD79BP40259 229 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 HTR3AP46098 478 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 CTBP2P56545 445 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 RNPS1Q15287 305 aaKnown RBP9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 ZSWIM7Q19AV6 140 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 RABL3Q5HYI8 236 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 REP15Q6BDI9 236 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 ABLIM2Q6H8Q1 611 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 DHRS4L2Q6PKH6 230 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 C22orf34Q6ZV56 151 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 SNX32Q86XE0 403 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 CADM2Q8N3J6 435 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 C3orf49Q96BT1 292 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 ZNF300Q96RE9 604 aaPredicted RBP9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 WFDC6Q9BQY6 131 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 GPATCH1Q9BRR8 931 aaKnown RBP9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 C12orf49Q9H741 205 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 BCO1Q9HAY6 547 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 ARMCX1Q9P291 453 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 ZNF232Q9UNY5 417 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 TESMINQ9Y4I5 508 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 SPIN1Q9Y657 262 aaPredicted RBP9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 PLCE1Q9P212 2302 aa9.78□□□□□ -0.84
SHKBP1-206ENST00000595523 PRRC2AP48634 2157 aaKnown RBP9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 SH3D21A4FU49 640 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 TMEM229AB2RXF0 380 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 ZNF208O43345 1280 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 PRKD3O94806 890 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 MFN2O95140 757 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 EPXP11678 715 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 POU2F1P14859 743 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 UQCRBP14927 111 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 SLC6A2P23975 617 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 HTR2AP28223 471 aa9.77□□□□□ -0.85
SHKBP1-206ENST00000595523 CLK1P49759 484 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms