RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 NPIPA5A0A0B4J1W7 369 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 OR2W5A6NFC9 320 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 NPIPA7E9PJI5 369 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 OR10H2O60403 315 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 TP53P04637 393 aaPredicted RBP15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 ACSM4P0C7M7 580 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 NPIPA8P0DM63 369 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 RFX3P48380 749 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 AGFG1P52594 562 aaKnown RBP15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 GFERP55789 205 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 RAB38P57729 211 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 PUDPQ08623 228 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 IL18Q14116 193 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 ERV3-1Q14264 604 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 LGALSLQ3ZCW2 172 aaPredicted RBP15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 PLA1AQ53H76 456 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 ENTPD8Q5MY95 495 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 DCST2Q5T1A1 773 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 FIGNL1Q6PIW4 674 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 ZNF836Q6ZNA1 936 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 METTL27Q8N6F8 245 aaPredicted RBP15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 COX18Q8N8Q8 333 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 OR11H7Q8NGC8 314 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 RIT1Q92963 219 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 TGM7Q96PF1 710 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 TVP23BQ9NYZ1 205 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 CNIH4Q9P003 139 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 ZNF222Q9UK12 451 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 SPAG17Q6Q759 2223 aa15.77■□□□□ 0.11
SHKBP1-205ENST00000594973 ARPC4-TTLL3A0A0A6YYG9 625 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 CSNK1EP49674 416 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 ZMYND11Q15326 602 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 P2RY14Q15391 338 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 SNAPC1Q16533 368 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 MAPK14Q16539 360 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 PLK5Q496M5 336 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 HSD17B12Q53GQ0 312 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 NKAIN2Q5VXU1 208 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 ZC3H14Q6PJT7 736 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 TCEANCQ8N8B7 351 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 OR6M1Q8NGM8 313 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 DIO2Q92813 273 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 NXPE2Q96DL1 559 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 PEX11GQ96HA9 241 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 REG4Q9BYZ8 158 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 EGLN3Q9H6Z9 239 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 SOHLH2Q9NX45 425 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 SLCO1C1Q9NYB5 712 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 NDOR1Q9UHB4 597 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 PRELID3BQ9Y3B1 194 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 VPS13AQ96RL7 3174 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 AGRPO00253 132 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 MGAT2Q10469 447 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 C1orf94Q6P1W5 598 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 PRICKLE2Q7Z3G6 844 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 NKAIN4Q8IVV8 208 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 PM20D2Q8IYS1 436 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 ARHGEF39Q8N4T4 335 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 CDRT4Q8N9R6 151 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 FAM46AQ96IP4 442 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 LINC00052Q96N35 136 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 OR2M2Q96R28 347 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 MCHR1Q99705 422 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 ZNF416Q9BWM5 594 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 COMMD3Q9UBI1 195 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 GSTK1Q9Y2Q3 226 aa15.76■□□□□ 0.11
SHKBP1-205ENST00000594973 MUC3AQ02505 3323 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 WDR87Q6ZQQ6 2873 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 A0A087WV62 115 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 MFSD2BA6NFX1 497 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 PEX12O00623 359 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 GABRA3P34903 492 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 ZNF81P51508 661 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 ST3GAL3Q11203 375 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 MAP4K2Q12851 820 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 COX10Q12887 443 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 GINS1Q14691 196 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 TRAM2Q15035 370 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 C3orf38Q5JPI3 329 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 ZNF57Q68EA5 555 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 MZT2AQ6P582 158 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 RRM2BQ7LG56 351 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 CADM4Q8NFZ8 388 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 OR52R1Q8NGF1 315 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 TCTN2Q96GX1 697 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 PLA2G12AQ9BZM1 189 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 PCDHB16Q9NRJ7 776 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 DMDP11532 3685 aa15.75■□□□□ 0.11
SHKBP1-205ENST00000594973 STX11O75558 287 aa15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 ZNF155Q12901 538 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 TUSC1Q2TAM9 212 aa15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 PRTGQ2VWP7 1150 aa15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 C12orf73Q69YU5 71 aa15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 LINC00471Q8N535 108 aa15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 MS4A15Q8N5U1 240 aa15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 ARSGQ96EG1 525 aa15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 DPYSL5Q9BPU6 564 aa15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 ZNF350Q9GZX5 532 aa15.74■□□□□ 0.11
SHKBP1-205ENST00000594973 MCCC2Q9HCC0 563 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms