RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TAB1Q15750 504 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 Q5PR19 223 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 AGBL2Q5U5Z8 902 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 ZNF100Q8IYN0 542 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 ITCHQ96J02 903 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 C18orf12Q96KH6 178 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 TMEM204Q9BSN7 226 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 OR11A1Q9GZK7 315 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 NGBQ9NPG2 151 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 EMC3Q9P0I2 261 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 C2CD3Q4AC94 2353 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 CRATP43155 626 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 POLR2JP52435 117 aaKnown RBP20.8■□□□□ 0.92
LSM4-204ENST00000594828 MVDP53602 400 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 PDK3Q15120 406 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 MRPL2Q5T653 305 aaKnown RBP20.8■□□□□ 0.92
LSM4-204ENST00000594828 MSANTD1Q6ZTZ1 278 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 BHLHA15Q7RTS1 189 aaPredicted RBP20.8■□□□□ 0.92
LSM4-204ENST00000594828 PEX5LQ8IYB4 626 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 MIER2Q8N344 545 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 DNAJA3Q96EY1 480 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 TPT1P8Q9HAU6 139 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 P2RX2Q9UBL9 471 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 USH1CQ9Y6N9 552 aa20.8■□□□□ 0.92
LSM4-204ENST00000594828 TMED7-TICAM2A0A0A6YYA0 188 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 CFAP73A6NFT4 308 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 ETFAP13804 333 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 UQCRBP14927 111 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 EDNRAP25101 427 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 POLR2HP52434 150 aaKnown RBP20.79■□□□□ 0.92
LSM4-204ENST00000594828 CAPRIN1Q14444 709 aaKnown RBP20.79■□□□□ 0.92
LSM4-204ENST00000594828 MAPK11Q15759 364 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 ABLIM2Q6H8Q1 611 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 EPGNQ6UW88 154 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.79■□□□□ 0.92
LSM4-204ENST00000594828 OR9I1Q8NGQ6 314 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 PERPQ96FX8 193 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 ESRP2Q9H6T0 727 aaKnown RBP20.79■□□□□ 0.92
LSM4-204ENST00000594828 CALML5Q9NZT1 146 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 TMEM181Q9P2C4 612 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 OSGIN1Q9UJX0 560 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 TRAPPC4Q9Y296 219 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 TMED7Q9Y3B3 224 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 VPS13CQ709C8 3753 aa20.79■□□□□ 0.92
LSM4-204ENST00000594828 RAI1Q7Z5J4 1906 aaPredicted RBP20.78■□□□□ 0.92
LSM4-204ENST00000594828 FREM1Q5H8C1 2179 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 IGKV3D-15A0A087WSY6 115 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 FAAHO00519 579 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 HS3ST1O14792 307 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 DNPH1O43598 174 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 LYZL6O75951 148 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 CNOT4O95628 575 aaKnown RBP20.78■□□□□ 0.92
LSM4-204ENST00000594828 TACR3P29371 465 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 SLC1A3P43003 542 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 OR2B6P58173 313 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 DSTNP60981 165 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 C6orf10Q5SRN2 563 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 PRSS57Q6UWY2 283 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 BIVMQ86UB2 503 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 ZNF611Q8N823 705 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 OR52P1PQ8NH57 321 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 PIGXQ8TBF5 258 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 AKAP1Q92667 903 aaKnown RBP eCLIP20.78■□□□□ 0.92
LSM4-204ENST00000594828 VPS33AQ96AX1 596 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 DDIT4LQ96D03 193 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 POTEKPQ9BYX7 375 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 RLIMQ9NVW2 624 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 NOSIPQ9Y314 301 aaKnown RBP20.78■□□□□ 0.92
LSM4-204ENST00000594828 DSCAMO60469 2012 aa20.78■□□□□ 0.92
LSM4-204ENST00000594828 TMEM72A0PK05 275 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 FAM234BA2RU67 622 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 ZNF716A6NP11 495 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 ZNF208O43345 1280 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 INHBBP09529 407 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 TFPTP0C1Z6 253 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 ADSLP30566 484 aaPredicted RBP20.77■□□□□ 0.92
LSM4-204ENST00000594828 MAP2K6P52564 334 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 CRISP3P54108 245 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 EPS8Q12929 822 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 GTDC1Q4AE62 458 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 NCMAPQ5T1S8 102 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 VRK2Q86Y07 508 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 CCDC103Q8IW40 242 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 ZNF440Q8IYI8 595 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 SLC38A5Q8WUX1 472 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 TMEM171Q8WVE6 324 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 AURKBQ96GD4 344 aaPredicted RBP20.77■□□□□ 0.92
LSM4-204ENST00000594828 C7orf26Q96N11 449 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 THUMPD1Q9NXG2 353 aaKnown RBP20.77■□□□□ 0.92
LSM4-204ENST00000594828 RNF115Q9Y4L5 304 aa20.77■□□□□ 0.92
LSM4-204ENST00000594828 GPR171O14626 319 aa20.76■□□□□ 0.91
LSM4-204ENST00000594828 CLOCKO15516 846 aa20.76■□□□□ 0.91
LSM4-204ENST00000594828 BCHEP06276 602 aa20.76■□□□□ 0.91
LSM4-204ENST00000594828 CD3EP07766 207 aa20.76■□□□□ 0.91
LSM4-204ENST00000594828 IGHV1-2P23083 117 aa20.76■□□□□ 0.91
LSM4-204ENST00000594828 SLC35A1P78382 337 aa20.76■□□□□ 0.91
LSM4-204ENST00000594828 STK11Q15831 433 aa20.76■□□□□ 0.91
LSM4-204ENST00000594828 LIN52Q52LA3 116 aa20.76■□□□□ 0.91
LSM4-204ENST00000594828 YTHDF3Q7Z739 585 aaKnown RBP20.76■□□□□ 0.91
LSM4-204ENST00000594828 UBE2J2Q8N2K1 259 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms