RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 SEZ6L2Q6UXD5 910 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 ZNF621Q6ZSS3 439 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 BHLHA15Q7RTS1 189 aaPredicted RBP20.62■□□□□ 0.89
MBD3-211ENST00000592965 HMGN2P46Q86SG4 172 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 MTDHQ86UE4 582 aaKnown RBP20.62■□□□□ 0.89
MBD3-211ENST00000592965 TMEM171Q8WVE6 324 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 CNOT9Q92600 299 aaKnown RBP20.62■□□□□ 0.89
MBD3-211ENST00000592965 PMM1Q92871 262 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 ZHX1-C8orf76Q96EF9 292 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 MAELQ96JY0 434 aaKnown RBP20.62■□□□□ 0.89
MBD3-211ENST00000592965 Q96MF0 132 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 SMR3AQ99954 134 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 ZNF701Q9NV72 531 aaPredicted RBP20.62■□□□□ 0.89
MBD3-211ENST00000592965 EMC3Q9P0I2 261 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 PRSS50Q9UI38 385 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 HDGFL3Q9Y3E1 203 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 RNF115Q9Y4L5 304 aa20.62■□□□□ 0.89
MBD3-211ENST00000592965 TFPIP10646 304 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 COX5AP20674 150 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 EDNRAP25101 427 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 HTR3AP46098 478 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 MAGOHP61326 146 aaKnown RBP20.61■□□□□ 0.89
MBD3-211ENST00000592965 NCMAPQ5T1S8 102 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 ALKBH2Q6NS38 261 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 ADGRG3Q86Y34 549 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 AKAP1Q92667 903 aaKnown RBP eCLIP20.61■□□□□ 0.893e-6■■■■□ 21.5
MBD3-211ENST00000592965 TLCD1Q96CP7 247 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 CXorf56Q9H5V9 222 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 ESRP2Q9H6T0 727 aaKnown RBP20.61■□□□□ 0.89
MBD3-211ENST00000592965 NKIRAS1Q9NYS0 192 aa20.61■□□□□ 0.89
MBD3-211ENST00000592965 ZNF716A6NP11 495 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 FAM171A2A8MVW0 826 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 FAAHO00519 579 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 KRT75O95678 551 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 IL6P05231 212 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 GSNP06396 782 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 KITP10721 976 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 COX20Q5RI15 118 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 PIWIL2Q8TC59 973 aaKnown RBP20.6■□□□□ 0.89
MBD3-211ENST00000592965 WDR60Q8WVS4 1066 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 ZNF775Q96BV0 537 aaPredicted RBP20.6■□□□□ 0.89
MBD3-211ENST00000592965 ARL5BQ96KC2 179 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 BDH2Q9BUT1 245 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 MANSC1Q9H8J5 431 aa20.6■□□□□ 0.89
MBD3-211ENST00000592965 MTHFD2LQ9H903 347 aaPredicted RBP20.6■□□□□ 0.89
MBD3-211ENST00000592965 H7C1Q1 480 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 RFXANKO14593 260 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 AP3D1O14617 1153 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 SLC22A3O75751 556 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 CD3EP07766 207 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 NR2F1P10589 423 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 IDH2P48735 452 aaKnown RBP20.59■□□□□ 0.89
MBD3-211ENST00000592965 SLC16A1P53985 500 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 LTBQ06643 244 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 GNA13Q14344 377 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 BEND6Q5SZJ8 279 aaPredicted RBP20.59■□□□□ 0.89
MBD3-211ENST00000592965 NXNQ6DKJ4 435 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 CLEC9AQ6UXN8 241 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 SSX8Q7RTT4 187 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 ZNF100Q8IYN0 542 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 PIGXQ8TBF5 258 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 PNPT1Q8TCS8 783 aaKnown RBP20.59■□□□□ 0.89
MBD3-211ENST00000592965 OR11A1Q9GZK7 315 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 SDR39U1Q9NRG7 319 aaPredicted RBP20.59■□□□□ 0.89
MBD3-211ENST00000592965 ZIM2Q9NZV7 527 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 HIVEP2P31629 2446 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 JMJD1CQ15652 2540 aa20.59■□□□□ 0.89
MBD3-211ENST00000592965 ERLIN1O75477 346 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 LYZL6O75951 148 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 HEXAP06865 529 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 DBIP07108 87 aaKnown RBP20.58■□□□□ 0.89
MBD3-211ENST00000592965 IGHV1-2P23083 117 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 MVDP53602 400 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 CAPRIN1Q14444 709 aaKnown RBP20.58■□□□□ 0.89
MBD3-211ENST00000592965 GSTA3Q16772 222 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 SLC9B1Q4ZJI4 515 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 DNAJC14Q6Y2X3 702 aaPredicted RBP20.58■□□□□ 0.89
MBD3-211ENST00000592965 MSANTD1Q6ZTZ1 278 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 MAVSQ7Z434 540 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 LILRB1Q8NHL6 650 aaPredicted RBP20.58■□□□□ 0.89
MBD3-211ENST00000592965 TMBIM4Q9HC24 238 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 SLC6A13Q9NSD5 602 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 TRAPPC4Q9Y296 219 aa20.58■□□□□ 0.89
MBD3-211ENST00000592965 TMED7-TICAM2A0A0A6YYA0 188 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 GPR171O14626 319 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 KLF11O14901 512 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 CLOCKO15516 846 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 ZNF208O43345 1280 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 ZCCHC18P0CG32 403 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 UQCRBP14927 111 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 SLC1A3P43003 542 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 POLR2HP52434 150 aaKnown RBP20.57■□□□□ 0.88
MBD3-211ENST00000592965 MAP2K6P52564 334 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 H3F3AP84243 136 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 MAPK11Q15759 364 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 MRPL2Q5T653 305 aaKnown RBP20.57■□□□□ 0.88
MBD3-211ENST00000592965 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.57■□□□□ 0.88
MBD3-211ENST00000592965 P2RY8Q86VZ1 359 aa20.57■□□□□ 0.88
MBD3-211ENST00000592965 CIARTQ8N365 385 aaPredicted RBP20.57■□□□□ 0.88
MBD3-211ENST00000592965 TMEM181Q9P2C4 612 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms