RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	UQCC2	Q9BRT2	126 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	UTP23	Q9BRU9	249 aa	Known RBP	13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	SLC38A1	Q9H2H9	487 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	SLC23A2	Q9UGH3	650 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	PCDHGA5	Q9Y5G8	931 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	GOLGA4	Q13439	2230 aa	Known RBP	13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	CHURC1-FNTB	B4DL54	471 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	GABARAP	H6UMI1	98 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	KDM4B	O94953	1096 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	HMGN2	P05204	90 aa	Known RBP	13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	ADRB3	P13945	408 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	LINC00303	Q3SY05	128 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	PDSS1	Q5T2R2	415 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	PRAMEF8	Q5VWM4	474 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	PRAMEF7	Q5VXH5	474 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	LCTL	Q6UWM7	567 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	GDF7	Q7Z4P5	450 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	PAQR7	Q86WK9	346 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	OR5J2	Q8NH18	312 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	ZNF671	Q8TAW3	534 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	HMGB4	Q8WW32	186 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	PNPLA2	Q96AD5	504 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	MFRP	Q9BY79	579 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	SLC6A20	Q9NP91	592 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	TM7SF3	Q9NS93	570 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	MED11	Q9P086	117 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	OPN4	Q9UHM6	478 aa		13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	MRPS23	Q9Y3D9	190 aa	Known RBP	13.36	□□□□□ -0.27
RFX2-222	ENST00000592546	CDHR4	A6H8M9	788 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	PTN	P21246	168 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	MAT2A	P31153	395 aa	Known RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	HOXA1	P49639	335 aa	Predicted RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	MECP2	P51608	486 aa	Known RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	ZNF85	Q03923	595 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	NUDT13	Q86X67	352 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	AMER3	Q8N944	861 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	OR2L2	Q8NH16	312 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	BRIX1	Q8TDN6	353 aa	Known RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	LRRC46	Q96FV0	321 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	CMTM3	Q96MX0	182 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	OR52A5	Q9H2C5	316 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	OR52D1	Q9H346	318 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	GPN1	Q9HCN4	374 aa	Predicted RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	KLK11	Q9UBX7	282 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	SIGLEC5	O15389	551 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	SIGLEC6	O43699	453 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	SIX6	O95475	246 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	MRPL3	P09001	348 aa	Known RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	NT5E	P21589	574 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	PYCR1	P32322	319 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	ANXA11	P50995	505 aa	Known RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	NCBP2	P52298	156 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	FXYD6P3	P58550	94 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	MAT1A	Q00266	395 aa	Known RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	SIGLEC14	Q08ET2	396 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	PUS10	Q3MIT2	529 aa	Known RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	OLFML2A	Q68BL7	652 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	LRRTM4	Q86VH4	590 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	LSR	Q86X29	649 aa	Predicted RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	PM20D2	Q8IYS1	436 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	C12orf76	Q8N812	135 aa	Predicted RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	C16orf58	Q96GQ5	468 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	SLC41A3	Q96GZ6	507 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	OR1F2P	Q96R84	312 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	TEAD3	Q99594	435 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	C1QTNF2	Q9BXJ5	285 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	KLHL9	Q9P2J3	617 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	ST6GALNAC2	Q9UJ37	374 aa		13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	PURG	Q9UJV8	347 aa	Known RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	AK6	Q9Y3D8	172 aa	Known RBP	13.35	□□□□□ -0.27
RFX2-222	ENST00000592546	SLC22A31	A6NKX4	558 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	BHLHE40	O14503	412 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	KRT33A	O76009	404 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	AQP8	O94778	261 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	SBK2	P0C263	348 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	TAS2R38	P59533	333 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	MELK	Q14680	651 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	TMEM64	Q6YI46	380 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	ETFBKMT	Q8IXQ9	262 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	GANC	Q8TET4	914 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	ZNF707	Q96C28	371 aa	Predicted RBP	13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	LINC00615	Q96LM1	132 aa	Predicted RBP	13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	ENKD1	Q9H0I2	346 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	SLC35C2	Q9NQQ7	365 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	C17orf113	A0A1B0GUU1	675 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	FEZF1	A0PJY2	475 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	ANKRD20A5P	A0PJZ0	165 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	ARL6IP5	O75915	188 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	PCDH8	O95206	1070 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	SERPINA3	P01011	423 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	PSMB5	P28074	263 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	VASP	P50552	380 aa	Predicted RBP	13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	DLX5	P56178	289 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	RGS8	P57771	180 aa	Predicted RBP	13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	FGL1	Q08830	312 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	FAAP20	Q6NZ36	180 aa		13.34	□□□□□ -0.27
RFX2-222	ENST00000592546	EID2	Q8N6I1	236 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms