RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 GALNT8Q9NY28 637 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 SLAMF8Q9P0V8 285 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 P2RX2Q9UBL9 471 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 DCTN4Q9UJW0 460 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 PRR14LQ5THK1 2151 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 GJE1A6NN92 205 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 CLIC1O00299 241 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 SS18L1O75177 396 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-211ENST00000590499 CYP7B1O75881 506 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 BCHEP06276 602 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 DBIP07108 87 aaKnown RBP10.01□□□□□ -0.81
SMAD4-211ENST00000590499 CD8BP10966 210 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 PGCP20142 388 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 CRATP43155 626 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 CRISP3P54108 245 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 CARD18P57730 90 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 FADDQ13158 208 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 MYBPHQ13203 477 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 ZNF239Q16600 458 aaKnown RBP10.01□□□□□ -0.81
SMAD4-211ENST00000590499 TMEM176BQ3YBM2 270 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-211ENST00000590499 AGKQ53H12 422 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 PDSS1Q5T2R2 415 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 C3orf33Q6P1S2 294 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 ZNF474Q6S9Z5 364 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-211ENST00000590499 PLEKHM3Q6ZWE6 761 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 FAM214BQ7L5A3 538 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 KIF18BQ86Y91 864 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 ZZZ3Q8IYH5 903 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 C10orf111Q8N326 155 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 CNEP1R1Q8N9A8 125 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 RNF128Q8TEB7 428 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 FAM222BQ8WU58 562 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 WDR60Q8WVS4 1066 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 TMEM234Q8WY98 164 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 OSTF1Q92882 214 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 TMEM19Q96HH6 336 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 GMPPAQ96IJ6 420 aaPredicted RBP10.01□□□□□ -0.81
SMAD4-211ENST00000590499 CCDC106Q9BWC9 280 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 IKZF5Q9H5V7 419 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 BCL2L10Q9HD36 194 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 A4GALTQ9NPC4 353 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 THUMPD1Q9NXG2 353 aaKnown RBP10.01□□□□□ -0.81
SMAD4-211ENST00000590499 CALML5Q9NZT1 146 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 VAPAQ9P0L0 249 aa10.01□□□□□ -0.81
SMAD4-211ENST00000590499 MCTS1Q9ULC4 181 aaKnown RBP10.01□□□□□ -0.81
SMAD4-211ENST00000590499 A0A1W2PP18 115 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 CDHR4A6H8M9 788 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 FAAHO00519 579 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 AP3D1O14617 1153 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 CTAG2O75638 210 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 CCKARP32238 428 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 CPA2P48052 419 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 SIRPAP78324 504 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 MERTKQ12866 999 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 DAZAP2Q15038 168 aaPredicted RBP10□□□□□ -0.81
SMAD4-211ENST00000590499 RPS26P11Q5JNZ5 115 aaPredicted RBP10□□□□□ -0.81
SMAD4-211ENST00000590499 MRPL2Q5T653 305 aaKnown RBP10□□□□□ -0.81
SMAD4-211ENST00000590499 PRAMEF8Q5VWM4 474 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 PRAMEF7Q5VXH5 474 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 CGB2Q6NT52 195 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 DLEU7Q6UYE1 221 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 GRINAQ7Z429 371 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 PEX5LQ8IYB4 626 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 ARFGAP2Q8N6H7 521 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 OR6K3Q8NGY3 331 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 CPNE4Q96A23 557 aaPredicted RBP10□□□□□ -0.81
SMAD4-211ENST00000590499 OPN3Q9H1Y3 402 aaPredicted RBP10□□□□□ -0.81
SMAD4-211ENST00000590499 RAD21L1Q9H4I0 556 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 RABEP2Q9H5N1 569 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 CCDC134Q9H6E4 229 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 CLEC4AQ9UMR7 237 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 CHST2Q9Y4C5 530 aa10□□□□□ -0.81
SMAD4-211ENST00000590499 MAP1AP78559 2803 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 A0A0G2JND7 137 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 A0A0G2JPF8 293 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 TUBAL3A6NHL2 446 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 HNRNPCL2B2RXH8 293 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 HNRNPCL3B7ZW38 293 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 HNRNPCL1O60812 293 aaKnown RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 SYNGR4O95473 234 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 HNRNPCL4P0DMR1 293 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 IL7RP16871 459 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 NCF2P19878 526 aaPredicted RBP9.99□□□□□ -0.81
SMAD4-211ENST00000590499 AGTR1P30556 359 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 RYKP34925 604 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 RAC3P60763 192 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 FAM27E3Q08E93 113 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 EPS8Q12929 822 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 GNA13Q14344 377 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 LIN52Q52LA3 116 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 SYT14P1Q58G82 188 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 RNF220Q5VTB9 566 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 METTL21CQ5VZV1 264 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 ZNF836Q6ZNA1 936 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 VRK2Q86Y07 508 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 DPP10Q8N608 796 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 ATP6V1C2Q8NEY4 427 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 OR52P1PQ8NH57 321 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 LINC01560Q8TB33 94 aa9.99□□□□□ -0.81
SMAD4-211ENST00000590499 ABHD3Q8WU67 409 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms