RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PCYT1AP49585 367 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 GZMMP51124 257 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 HOXC5Q00444 222 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 CDK6Q00534 326 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 CAPRIN1Q14444 709 aaKnown RBP16.23■□□□□ 0.19
DDX39A-212ENST00000590260 DAZAP2Q15038 168 aaPredicted RBP16.23■□□□□ 0.19
DDX39A-212ENST00000590260 ZNF311Q5JNZ3 666 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 KIF18BQ86Y91 864 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 LRRC46Q96FV0 321 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 SLC39A3Q9BRY0 314 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 PROCRQ9UNN8 238 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 TMED7Q9Y3B3 224 aa16.23■□□□□ 0.19
DDX39A-212ENST00000590260 POLQO75417 2590 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 A6NNC1 897 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 ANGPT2O15123 496 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 SIAH2O43255 324 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 CYTIPO60759 359 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 FESP07332 822 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 EPXP11678 715 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 ETS2P15036 469 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 PEX19P40855 299 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 GNA13Q14344 377 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 WFIKKN1Q96NZ8 548 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 ZNF300Q96RE9 604 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-212ENST00000590260 C12orf49Q9H741 205 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 KAT8Q9H7Z6 458 aaKnown RBP16.22■□□□□ 0.19
DDX39A-212ENST00000590260 BCO1Q9HAY6 547 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 SLC24A3Q9HC58 644 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 SERINC1Q9NRX5 453 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 GLRX2Q9NS18 164 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 RASSF1Q9NS23 344 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 KLHL14Q9P2G3 628 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 KLHL13Q9P2N7 655 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 EMC9Q9Y3B6 208 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 TESMINQ9Y4I5 508 aa16.22■□□□□ 0.19
DDX39A-212ENST00000590260 ZNF716A6NP11 495 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 PRKD3O94806 890 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 PLGP00747 810 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-212ENST00000590260 NTF4P34130 210 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 UGT2B10P36537 528 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 POLR2HP52434 150 aaKnown RBP16.21■□□□□ 0.19
DDX39A-212ENST00000590260 PCBP3P57721 371 aaKnown RBP16.21■□□□□ 0.19
DDX39A-212ENST00000590260 NFYCQ13952 458 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 SCARB2Q14108 478 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 LARS2Q15031 903 aaKnown RBP16.21■□□□□ 0.19
DDX39A-212ENST00000590260 ABLIM2Q6H8Q1 611 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 REEP3Q6NUK4 255 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 TFAP2EQ6VUC0 442 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 NET1Q7Z628 596 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-212ENST00000590260 ZNF440Q8IYI8 595 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 SLC25A43Q8WUT9 341 aaPredicted RBP16.21■□□□□ 0.19
DDX39A-212ENST00000590260 PRR14Q9BWN1 585 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 LIME1Q9H400 295 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 TIGARQ9NQ88 270 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 IFT52Q9Y366 437 aa16.21■□□□□ 0.19
DDX39A-212ENST00000590260 ANKHD1Q8IWZ3 2542 aaKnown RBP16.21■□□□□ 0.19
DDX39A-212ENST00000590260 SH3D21A4FU49 640 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 SULT2B1O00204 365 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 TPST2O60704 377 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 PMS2P2O95744 297 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 TFPIP10646 304 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 POU2F1P14859 743 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 HTR2AP28223 471 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 AQP1P29972 269 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 PRKAR1BP31321 381 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 HTR3AP46098 478 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 CRYBA2P53672 197 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 CTBP2P56545 445 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 H3F3AP84243 136 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 DMTNQ08495 405 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 BNIP2Q12982 314 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 RNPS1Q15287 305 aaKnown RBP16.2■□□□□ 0.18
DDX39A-212ENST00000590260 EXOC3L2Q2M3D2 409 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 RABL3Q5HYI8 236 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 NANOGP8Q6NSW7 305 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 DHRS4L2Q6PKH6 230 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 STAC2Q6ZMT1 411 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 ZNF550Q7Z398 422 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 C3orf49Q96BT1 292 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 ZNF775Q96BV0 537 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-212ENST00000590260 NANOGQ9H9S0 305 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 ELOVL5Q9NYP7 299 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 USP22Q9UPT9 525 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 HDGFL3Q9Y3E1 203 aa16.2■□□□□ 0.18
DDX39A-212ENST00000590260 TMEM247A6NEH6 219 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 EVPLLA8MZ36 301 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 TMEM229AB2RXF0 380 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 C5orf58C9J3I9 102 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 ZNF208O43345 1280 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 MFN2O95140 757 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 THBDP07204 575 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 YES1P07947 543 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 CLK1P49759 484 aaKnown RBP16.19■□□□□ 0.18
DDX39A-212ENST00000590260 RASGEF1BQ0VAM2 473 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 TRMT5Q32P41 509 aaKnown RBP16.19■□□□□ 0.18
DDX39A-212ENST00000590260 ANKRD34AQ69YU3 496 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 REP15Q6BDI9 236 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 WBP2NLQ6ICG8 309 aa16.19■□□□□ 0.18
DDX39A-212ENST00000590260 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.19■□□□□ 0.18
DDX39A-212ENST00000590260 ATG4DQ86TL0 474 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms