RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 PERM1Q5SV97 790 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 CD200R1LQ6Q8B3 271 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 TMPRSS11AQ6ZMR5 421 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 MEPCEQ7L2J0 689 aaKnown RBP9.15□□□□□ -0.94
VPS25-202ENST00000589219 CCDC190Q86UF4 302 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 TMPRSS12Q86WS5 348 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 GATAD2AQ86YP4 633 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 SHISA5Q8N114 240 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 BCORP1Q8N888 145 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 ZNF485Q8NCK3 441 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 RCBTB1Q8NDN9 531 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 FAM71CQ8NEG0 241 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 OR13C2Q8NGS9 318 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 SAP25Q8TEE9 199 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 AP3S1Q92572 193 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 MARVELD3Q96A59 401 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 KCTD7Q96MP8 289 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 SLC46A1Q96NT5 459 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 IFT27Q9BW83 186 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 EXOSC3Q9NQT5 275 aaKnown RBP9.15□□□□□ -0.94
VPS25-202ENST00000589219 LANCL2Q9NS86 450 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 C20orf141Q9NUB4 165 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 ASB6Q9NWX5 421 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 TXNL4BQ9NX01 149 aaKnown RBP9.15□□□□□ -0.94
VPS25-202ENST00000589219 FLRT3Q9NZU0 649 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 LRIT1Q9P2V4 623 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 TNFRSF10DQ9UBN6 386 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 KLHL21Q9UJP4 597 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 POLHQ9Y253 713 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 DTX4Q9Y2E6 619 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 CARD8Q9Y2G2 431 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 GSTK1Q9Y2Q3 226 aa9.15□□□□□ -0.94
VPS25-202ENST00000589219 ARHGEF17Q96PE2 2063 aaPredicted RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 IGKV3D-11A0A0A0MRZ8 115 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 TRDV1A0A1B0GX56 115 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 FUOMA2VDF0 154 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 TRABD2BA6NFA1 517 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 C17orf105B2RV13 164 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 PRR23D1E9PI22 279 aaPredicted RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 H3BMH7 237 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 J3QRE1 110 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 SOCS6O14544 535 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 SDC3O75056 442 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 NDUFB2O95178 105 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 IL33O95760 270 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 PTTG1O95997 202 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 CSTAP01040 98 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 PRR23D2P0DMB1 279 aaPredicted RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 GLB1P16278 677 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 HK1P19367 917 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 CD53P19397 219 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 MAOAP21397 527 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 FBLP22087 321 aaKnown RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 EPHA8P29322 1005 aaPredicted RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 FGF9P31371 208 aaPredicted RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 RORAP35398 523 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 ATP6V1E1P36543 226 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 TAS2R43P59537 309 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 DEFA1P59665 94 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 DEFA3P59666 94 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 BTG2P78543 158 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 GPR50Q13585 617 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 ELAVL1Q15717 326 aaKnown RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 OR2G6Q5TZ20 316 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 LCN1P1Q5VSP4 162 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 PLBD1Q6P4A8 553 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 KIRREL2Q6UWL6 708 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 DHRS13Q6UX07 377 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 LINC00114Q6XXX2 140 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 CPOQ8IVL8 374 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 GPR135Q8IZ08 494 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 D2HGDHQ8N465 521 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 METTL27Q8N6F8 245 aaPredicted RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 ACBD7Q8N6N7 88 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 BBS1Q8NFJ9 593 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 OR4N2Q8NGD1 307 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 TM9SF4Q92544 642 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 SLC25A46Q96AG3 418 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 SGTBQ96EQ0 304 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 SLC30A2Q9BRI3 323 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 NDEL1Q9GZM8 345 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 SPRTNQ9H040 489 aaPredicted RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 SYNDIG1Q9H7V2 258 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 CPNE5Q9HCH3 593 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 ATP13A2Q9NQ11 1180 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 MEPEQ9NQ76 525 aaPredicted RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 RHBDL2Q9NX52 303 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 ERVK13-1Q9NX77 482 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 ICAM5Q9UMF0 924 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 TRAPPC4Q9Y296 219 aa9.14□□□□□ -0.95
VPS25-202ENST00000589219 SF3B6Q9Y3B4 125 aaKnown RBP9.14□□□□□ -0.95
VPS25-202ENST00000589219 CACNA1GO43497 2377 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 A0A087WUJ7 227 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 SLC35F4A4IF30 521 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 CCDC182A6NF36 153 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 HRKO00198 91 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 PTP4A3O75365 173 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 RFPL3O75679 317 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 APOL3O95236 402 aa9.13□□□□□ -0.95
VPS25-202ENST00000589219 SLC2A10O95528 541 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms