RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 TMEM251Q8N6I4 163 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 FAM83FQ8NEG4 500 aaPredicted RBP20.49■□□□□ 0.87
ACTN4-210ENST00000588618 TMEM255BQ8WV15 326 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 TMEM239Q8WW34 195 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 NRBF2Q96F24 287 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 SLC29A1Q99808 456 aa20.49■□□□□ 0.87
ACTN4-210ENST00000588618 PDP1Q9P0J1 537 aaPredicted RBP20.49■□□□□ 0.87
ACTN4-210ENST00000588618 SPIN1Q9Y657 262 aaPredicted RBP20.49■□□□□ 0.87
ACTN4-210ENST00000588618 A0A087WUU8 490 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 TMED7-TICAM2A0A0A6YYA0 188 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 SOCS2O14508 198 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 TFECO14948 347 aaPredicted RBP20.48■□□□□ 0.87
ACTN4-210ENST00000588618 OR10H3O60404 316 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 GLSO94925 669 aaPredicted RBP20.48■□□□□ 0.87
ACTN4-210ENST00000588618 RBM34P42696 430 aaKnown RBP20.48■□□□□ 0.87
ACTN4-210ENST00000588618 MAGEA5P43359 124 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 SNCBQ16143 134 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 GLYR1Q49A26 553 aaPredicted RBP20.48■□□□□ 0.87
ACTN4-210ENST00000588618 SLC25A53Q5H9E4 307 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 LINC00114Q6XXX2 140 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 YRDCQ86U90 279 aaKnown RBP20.48■□□□□ 0.87
ACTN4-210ENST00000588618 QPCTLQ9NXS2 382 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 TMED7Q9Y3B3 224 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 MED31Q9Y3C7 131 aa20.48■□□□□ 0.87
ACTN4-210ENST00000588618 MRPS18CQ9Y3D5 142 aaKnown RBP20.48■□□□□ 0.87
ACTN4-210ENST00000588618 SH3PXD2BA1X283 911 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 ETV2O00321 342 aaPredicted RBP20.47■□□□□ 0.87
ACTN4-210ENST00000588618 ZNF17P17021 662 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 GCKP35557 465 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 IFNGR2P38484 337 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 PMP22Q01453 160 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 INAQ16352 499 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 MICAQ29983 383 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 OTUD3Q5T2D3 398 aaPredicted RBP20.47■□□□□ 0.87
ACTN4-210ENST00000588618 STK32CQ86UX6 486 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 GTPBP8Q8N3Z3 284 aaPredicted RBP20.47■□□□□ 0.87
ACTN4-210ENST00000588618 OR9Q2Q8NGE9 314 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 OR5M1Q8NGP8 315 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 POC1BQ8TC44 478 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 GIPC3Q8TF64 312 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 CNTNAP3BQ96NU0 1288 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 C9orf16Q9BUW7 83 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 ZNF426Q9BUY5 554 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 CNTNAP3Q9BZ76 1288 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 COQ10BQ9H8M1 238 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 KIF17Q9P2E2 1029 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 CHRNA9Q9UGM1 479 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 C7orf72A4D263 438 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 KPNA4O00629 521 aaPredicted RBP20.47■□□□□ 0.87
ACTN4-210ENST00000588618 SUSD5O60279 629 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 ZIC3O60481 467 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 SFTPCP11686 197 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 MAP2K6P52564 334 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 UGT2B15P54855 530 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 DLX5P56178 289 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 SLC10A1Q14973 349 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 SLC6A19Q695T7 634 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 ZNF770Q6IQ21 691 aaPredicted RBP20.47■□□□□ 0.87
ACTN4-210ENST00000588618 C3orf33Q6P1S2 294 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 RNF113BQ8IZP6 322 aaKnown RBP20.47■□□□□ 0.87
ACTN4-210ENST00000588618 OR10G2Q8NGC3 310 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 PNPLA2Q96AD5 504 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 SFXN2Q96NB2 322 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 KLHL4Q9C0H6 718 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 OR2B2Q9GZK3 357 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 RASSF4Q9H2L5 321 aa20.47■□□□□ 0.87
ACTN4-210ENST00000588618 TLN1Q9Y490 2541 aaKnown RBP20.46■□□□□ 0.87
ACTN4-210ENST00000588618 HPNP05981 417 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 ELK4P28324 431 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 SELENBP1Q13228 472 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 WIPI1Q5MNZ9 446 aaPredicted RBP20.46■□□□□ 0.87
ACTN4-210ENST00000588618 RPUSD3Q6P087 351 aaKnown RBP20.46■□□□□ 0.87
ACTN4-210ENST00000588618 ADGRG3Q86Y34 549 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 P3H2Q8IVL5 708 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 CDK20Q8IZL9 346 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 CBR4Q8N4T8 237 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 ATP6V1C2Q8NEY4 427 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 OR4K5Q8NGD3 323 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 PIGXQ8TBF5 258 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 DDIT4LQ96D03 193 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 ZNF407Q9C0G0 2248 aa20.46■□□□□ 0.87
ACTN4-210ENST00000588618 IGKV1D-42A0A075B6H8 117 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 PIP5K1CO60331 668 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 ZNF26P17031 533 aaPredicted RBP20.45■□□□□ 0.86
ACTN4-210ENST00000588618 ST3GAL2Q16842 350 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 PLEKHN1Q494U1 663 aaPredicted RBP20.45■□□□□ 0.86
ACTN4-210ENST00000588618 ZBTB49Q6ZSB9 765 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 MBOAT2Q6ZWT7 520 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 MEX3DQ86XN8 651 aaKnown RBP20.45■□□□□ 0.86
ACTN4-210ENST00000588618 NRMQ8IXM6 262 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 TEX19Q8NA77 164 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 ATG16L2Q8NAA4 619 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 TMEM43Q9BTV4 400 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 SLC19A3Q9BZV2 496 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 VCXQ9H320 206 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 VCX3BQ9H321 246 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 LDAHQ9H6V9 325 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 SMURF2Q9HAU4 748 aa20.45■□□□□ 0.86
ACTN4-210ENST00000588618 OR2M5A3KFT3 312 aa20.44■□□□□ 0.86
ACTN4-210ENST00000588618 A8MVM7 634 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms