RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 PGAM4Q8N0Y7 254 aa12.95□□□□□ -0.34
RANBP3-208ENST00000587263 ZNF540Q8NDQ6 660 aa12.95□□□□□ -0.34
RANBP3-208ENST00000587263 POC1BQ8TC44 478 aa12.95□□□□□ -0.34
RANBP3-208ENST00000587263 FAM110BQ8TC76 370 aa12.95□□□□□ -0.34
RANBP3-208ENST00000587263 ZNF483Q8TF39 744 aaPredicted RBP12.95□□□□□ -0.34
RANBP3-208ENST00000587263 PHF21BQ96EK2 531 aa12.95□□□□□ -0.34
RANBP3-208ENST00000587263 THTPAQ9BU02 230 aa12.95□□□□□ -0.34
RANBP3-208ENST00000587263 LMF2Q9BU23 707 aaKnown RBP12.95□□□□□ -0.34
RANBP3-208ENST00000587263 BHLHE41Q9C0J9 482 aaPredicted RBP12.95□□□□□ -0.34
RANBP3-208ENST00000587263 WDR55Q9H6Y2 383 aaPredicted RBP12.95□□□□□ -0.34
RANBP3-208ENST00000587263 BCO1Q9HAY6 547 aa12.95□□□□□ -0.34
RANBP3-208ENST00000587263 MYOZ1Q9NP98 299 aaPredicted RBP12.95□□□□□ -0.34
RANBP3-208ENST00000587263 MYNNQ9NPC7 610 aa12.95□□□□□ -0.34
RANBP3-208ENST00000587263 LOC390937A0A1W2PQ73 354 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 BBIP1A8MTZ0 92 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 E9PBE3 544 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 SMAD9O15198 467 aaKnown RBP12.94□□□□□ -0.34
RANBP3-208ENST00000587263 UBDO15205 165 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 RGS14O43566 566 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 PCDH7O60245 1069 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 PSMG1O95456 288 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 ANP32DO95626 131 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 CHEK2O96017 543 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 OTCP00480 354 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 JUNP05412 331 aaKnown RBP12.94□□□□□ -0.34
RANBP3-208ENST00000587263 NGFRP08138 427 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 UROSP10746 265 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 HSD3B1P14060 373 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 IGHV1-2P23083 117 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 HSD3B2P26439 372 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 SHC1P29353 583 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 NCBP2P52298 156 aaKnown RBP eCLIP12.94□□□□□ -0.342e-6■■□□□ 12.8
RANBP3-208ENST00000587263 CLCQ05315 142 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 SLC34A1Q06495 639 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 KANK2Q63ZY3 851 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 TMEM107Q6UX40 140 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 GATSQ8NAP1 163 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 NSUN5Q96P11 429 aaKnown RBP12.94□□□□□ -0.34
RANBP3-208ENST00000587263 ZNF382Q96SR6 550 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 OCEL1Q9H607 264 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 SLC7A8Q9UHI5 535 aa12.94□□□□□ -0.34
RANBP3-208ENST00000587263 TMEFF2Q9UIK5 374 aaPredicted RBP12.94□□□□□ -0.34
RANBP3-208ENST00000587263 MYO1GB0I1T2 1018 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 UPK1AO00322 258 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 VENTXO95231 258 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 OXSR1O95747 527 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-208ENST00000587263 IGKV1D-16P01601 117 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 APOBEC3AP31941 199 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-208ENST00000587263 GABRA3P34903 492 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 KPNB1Q14974 876 aaKnown RBP12.93□□□□□ -0.34
RANBP3-208ENST00000587263 CARTPTQ16568 116 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 PDLIM3Q53GG5 364 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-208ENST00000587263 MISPQ8IVT2 679 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 OR2L13Q8N349 312 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 ZNF433Q8N7K0 673 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-208ENST00000587263 SH3YL1Q96HL8 342 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-208ENST00000587263 FOXN4Q96NZ1 517 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 PSD2Q9BQI7 771 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 CXorf36Q9H7Y0 433 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 FKRPQ9H9S5 495 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 ATP23Q9Y6H3 246 aa12.93□□□□□ -0.34
RANBP3-208ENST00000587263 GXYLT2A0PJZ3 443 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 M0R1B8 84 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 ENTPD5O75356 428 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 RAD51DO75771 328 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 LINGO3P0C6S8 592 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 IDO1P14902 403 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 HPGDP15428 266 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 GSTM5P46439 218 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 STX1BP61266 288 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 CHRNEQ04844 493 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 FOXF1Q12946 379 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 PDCD2Q16342 344 aaPredicted RBP12.92□□□□□ -0.34
RANBP3-208ENST00000587263 SPIN4Q56A73 249 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 NXNQ6DKJ4 435 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 LETMD1Q6P1Q0 360 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 ZNF100Q8IYN0 542 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 SEMA6DQ8NFY4 1073 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 OR4C3Q8NH37 302 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 OR52N5Q8NH56 324 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 B4GALNT2Q8NHY0 566 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 ZFP90Q8TF47 636 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 C16orf78Q8WTQ4 265 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 ROPN1LQ96C74 230 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 SORCS2Q96PQ0 1159 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 COQ10BQ9H8M1 238 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 DNAJC15Q9Y5T4 150 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 SLC25A15Q9Y619 301 aa12.92□□□□□ -0.34
RANBP3-208ENST00000587263 CIB4A0PJX0 185 aa12.91□□□□□ -0.34
RANBP3-208ENST00000587263 NPPAP01160 153 aa12.91□□□□□ -0.34
RANBP3-208ENST00000587263 LBPP18428 481 aa12.91□□□□□ -0.34
RANBP3-208ENST00000587263 PCMT1P22061 227 aa12.91□□□□□ -0.34
RANBP3-208ENST00000587263 ENPP1P22413 925 aa12.91□□□□□ -0.34
RANBP3-208ENST00000587263 NTSP30990 170 aa12.91□□□□□ -0.34
RANBP3-208ENST00000587263 VHLP40337 213 aa12.91□□□□□ -0.34
RANBP3-208ENST00000587263 RAC3P60763 192 aa12.91□□□□□ -0.34
RANBP3-208ENST00000587263 PHC1P78364 1004 aa12.91□□□□□ -0.34
RANBP3-208ENST00000587263 RAE1P78406 368 aaKnown RBP12.91□□□□□ -0.34
RANBP3-208ENST00000587263 ACSM2AQ08AH3 577 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms