RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 STK32CQ86UX6 486 aa16.94■□□□□ 0.3
TPM4-204ENST00000586499 SLC43A2Q8N370 569 aa16.94■□□□□ 0.3
TPM4-204ENST00000586499 SLC25A43Q8WUT9 341 aaPredicted RBP16.94■□□□□ 0.3
TPM4-204ENST00000586499 ZNF300Q96RE9 604 aaPredicted RBP16.94■□□□□ 0.3
TPM4-204ENST00000586499 IKZF5Q9H5V7 419 aa16.94■□□□□ 0.3
TPM4-204ENST00000586499 A4GALTQ9NPC4 353 aa16.94■□□□□ 0.3
TPM4-204ENST00000586499 THUMPD1Q9NXG2 353 aaKnown RBP16.94■□□□□ 0.3
TPM4-204ENST00000586499 OSGIN1Q9UJX0 560 aa16.94■□□□□ 0.3
TPM4-204ENST00000586499 TMED7Q9Y3B3 224 aa16.94■□□□□ 0.3
TPM4-204ENST00000586499 TRBV5-3A0A0A0MS03 114 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 A0A0G2JND7 137 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 TMEM72A0PK05 275 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 TMEM247A6NEH6 219 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 THBDP07204 575 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 BMP2P12643 396 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 EDNRAP25101 427 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 ACAA2P42765 397 aaKnown RBP16.93■□□□□ 0.3
TPM4-204ENST00000586499 SLC1A3P43003 542 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 SF3A3Q12874 501 aaKnown RBP eCLIP16.93■□□□□ 0.3
TPM4-204ENST00000586499 FADDQ13158 208 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 TSC22D1Q15714 1073 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 LIN52Q52LA3 116 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 TFAP2EQ6VUC0 442 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.93■□□□□ 0.3
TPM4-204ENST00000586499 RSPO3Q9BXY4 272 aaPredicted RBP16.93■□□□□ 0.3
TPM4-204ENST00000586499 RAD21L1Q9H4I0 556 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 ZNF385DQ9H6B1 395 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 BCO1Q9HAY6 547 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 ZNF226Q9NYT6 803 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 KLHL9Q9P2J3 617 aa16.93■□□□□ 0.3
TPM4-204ENST00000586499 SPIN1Q9Y657 262 aaPredicted RBP16.93■□□□□ 0.3
TPM4-204ENST00000586499 A0A1W2PP18 115 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 ZC3H12DA2A288 527 aaKnown RBP16.92■□□□□ 0.3
TPM4-204ENST00000586499 FAAHO00519 579 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 CRYGSP22914 178 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 POLR2HP52434 150 aaKnown RBP16.92■□□□□ 0.3
TPM4-204ENST00000586499 CSNK2A1P68400 391 aaPredicted RBP16.92■□□□□ 0.3
TPM4-204ENST00000586499 LARS2Q15031 903 aaKnown RBP16.92■□□□□ 0.3
TPM4-204ENST00000586499 DLEU7Q6UYE1 221 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 MTDHQ86UE4 582 aaKnown RBP16.92■□□□□ 0.3
TPM4-204ENST00000586499 CXorf67Q86X51 503 aaPredicted RBP16.92■□□□□ 0.3
TPM4-204ENST00000586499 NFKBIDQ8NI38 313 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 STON2Q8WXE9 905 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 PIK3IP1Q96FE7 263 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 ADAM19Q9H013 955 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 GP6Q9HCN6 339 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 BCL2L10Q9HD36 194 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 TMEM45AQ9NWC5 275 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 ZNF232Q9UNY5 417 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 FREM1Q5H8C1 2179 aa16.92■□□□□ 0.3
TPM4-204ENST00000586499 ZNF814B7Z6K7 855 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 FRS3O43559 492 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 RAMP1O60894 148 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 GCM2O75603 506 aaPredicted RBP16.91■□□□□ 0.3
TPM4-204ENST00000586499 GOSR1O95249 250 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 PGM3O95394 542 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 PMS2P2O95744 297 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 THBS1P07996 1170 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 HTR3AP46098 478 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 OR2B6P58173 313 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 IRX1P78414 480 aaPredicted RBP16.91■□□□□ 0.3
TPM4-204ENST00000586499 HOXC5Q00444 222 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 ZNF311Q5JNZ3 666 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 RNF220Q5VTB9 566 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 PAMR1Q6UXH9 720 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 SERPINA11Q86U17 422 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 CCDC103Q8IW40 242 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 ZNF440Q8IYI8 595 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 GABRG1Q8N1C3 465 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 CADM2Q8N3J6 435 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 HS3ST6Q96QI5 342 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 SPATA9Q9BWV2 254 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 ACTR6Q9GZN1 396 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 RABEP2Q9H5N1 569 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.91■□□□□ 0.3
TPM4-204ENST00000586499 PRSS50Q9UI38 385 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 HDGFL3Q9Y3E1 203 aa16.91■□□□□ 0.3
TPM4-204ENST00000586499 HIVEP1P15822 2718 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 TEP1Q99973 2627 aaKnown RBP16.9■□□□□ 0.3
TPM4-204ENST00000586499 C5orf58C9J3I9 102 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 ARAFP10398 606 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 IMPDH2P12268 514 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 UQCRBP14927 111 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 DNASE1P24855 282 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 CLK1P49759 484 aaKnown RBP16.9■□□□□ 0.3
TPM4-204ENST00000586499 BNIP2Q12982 314 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 GCNT6Q5T4J0 391 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 RETREG3Q86VR2 466 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 BBS10Q8TAM1 723 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 NINJ1Q92982 152 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 TMEM120AQ9BXJ8 343 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 TMEM181Q9P2C4 612 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 TRIM33Q9UPN9 1127 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 GPR52Q9Y2T5 361 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 IFT52Q9Y366 437 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 NDUFAF1Q9Y375 327 aa16.9■□□□□ 0.3
TPM4-204ENST00000586499 ZNF716A6NP11 495 aa16.89■□□□□ 0.29
TPM4-204ENST00000586499 ZNF724A8MTY0 619 aa16.89■□□□□ 0.29
TPM4-204ENST00000586499 ZNF208O43345 1280 aa16.89■□□□□ 0.29
TPM4-204ENST00000586499 ADAP00813 363 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms