RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 A0A075B6Q4 140 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 LY6G6EA0A0G2JKS1 128 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 PNMA8CA0A1B0GUJ8 204 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 SAGE2PA6NJ88 616 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 ZNF670-ZNF695F2Z2N8 137 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 SOCS6O14544 535 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 IDH3BO43837 385 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 TSPAN2O60636 221 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 CFIP05156 583 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 LIMS3P0CW19 117 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 LIMS4P0CW20 117 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 GAAP10253 952 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 NOS3P29474 1203 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 CD40LGP29965 261 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 SOX3P41225 446 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 CRYBB2P43320 205 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 PRPS1P60891 318 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 LGALS3BPQ08380 585 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 PLCXD2Q0VAA5 305 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 SKP2Q13309 424 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 GPR50Q13585 617 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 EFR3AQ14156 821 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 NKAIN1Q4KMZ8 207 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 LCN1P1Q5VSP4 162 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 PRAMEF17Q5VTA0 474 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 PLBD1Q6P4A8 553 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 PAQR6Q6TCH4 344 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 THSD4Q6ZMP0 1018 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 ZNF574Q6ZN55 896 aaPredicted RBP10.32□□□□□ -0.76
LIG3-204ENST00000585740 DPY19L2P2Q6ZN68 376 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 COX15Q7KZN9 410 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 ATG4DQ86TL0 474 aaPredicted RBP10.32□□□□□ -0.76
LIG3-204ENST00000585740 IGFN1Q86VF2 1251 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 C1orf210Q8IVY1 113 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 ACBD7Q8N6N7 88 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 ZNF321PQ8N8H1 164 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 OR51A7Q8NH64 312 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 STT3BQ8TCJ2 826 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 LIPHQ8WWY8 451 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 OTULINQ96BN8 352 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 TNFRSF13CQ96RJ3 184 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 GAL3ST4Q96RP7 486 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 ASPNQ9BXN1 380 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 GAREM1Q9H706 876 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 MCCC2Q9HCC0 563 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 ERVK13-1Q9NX77 482 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 HAO2Q9NYQ3 351 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 NCDNQ9UBB6 729 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 ATXN7L1Q9ULK2 861 aaPredicted RBP10.32□□□□□ -0.76
LIG3-204ENST00000585740 CARD8Q9Y2G2 431 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 GSTK1Q9Y2Q3 226 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 PCDHGB6Q9Y5F9 930 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 U3KQA8 63 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 CHD6Q8TD26 2715 aa10.32□□□□□ -0.76
LIG3-204ENST00000585740 SDK1Q7Z5N4 2213 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 MAP1BP46821 2468 aaKnown RBP10.31□□□□□ -0.76
LIG3-204ENST00000585740 ADAMTS9Q9P2N4 1935 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 TRAV27A0A087WT01 109 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 IGHV5-10-1A0A0J9YXX1 117 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 A0A1B0GVG6 124 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 A0A1W2PQM1 296 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 DCDC2BA2VCK2 349 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ALG1L2C9J202 215 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 J3QRE1 110 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ARPC3O15145 178 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ADAM11O75078 769 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 RFPL3O75679 317 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 SCRG1O75711 98 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 SLC2A10O95528 541 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 PPP1R3DO95685 299 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 IL1AP01583 271 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 HEXBP07686 556 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 SYPP08247 313 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 BMP4P12644 408 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 FUT1P19526 365 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 PGCP20142 388 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 PTNP21246 168 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 GALP22466 123 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 GABRA5P31644 462 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 IDUAP35475 653 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 TGFBR1P36897 503 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 GRK6P43250 576 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 RORCP51449 518 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 NR0B1P51843 470 aaKnown RBP10.31□□□□□ -0.76
LIG3-204ENST00000585740 PPP5CP53041 499 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 NRG3P56975 720 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ACTC1P68032 377 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ACTA1P68133 377 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 DCDP81605 110 aaKnown RBP10.31□□□□□ -0.76
LIG3-204ENST00000585740 DAB2P98082 770 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ZNF45Q02386 682 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ITGADQ13349 1161 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 TRA2AQ13595 282 aaKnown RBP eCLIP10.31□□□□□ -0.76
LIG3-204ENST00000585740 RGS21Q2M5E4 152 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 LIPKQ5VXJ0 399 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 Q6ZNX1 250 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 OVCH1Q7RTY7 1134 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 ZBTB46Q86UZ6 589 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 MISPQ8IVT2 679 aa10.31□□□□□ -0.76
LIG3-204ENST00000585740 C9orf40Q8IXQ3 194 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms