RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 DGKAP23743 735 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LMO2P25791 158 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FKBP2P26885 142 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MIPP30301 263 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ALDH3A1P30838 453 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 AHRP35869 848 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MMP12P39900 470 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LIMK2P53671 638 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC18A1P54219 525 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 HILS1P60008 231 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 HERV-K104P61576 105 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 HERV-K104P63124 156 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC25A11Q02978 314 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CNPY1Q3B7I2 92 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM41BQ5BJD5 291 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SIRPB2Q5JXA9 342 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 C9orf64Q5T6V5 341 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SCARA5Q6ZMJ2 495 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 C17orf107Q6ZR85 190 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 Q6ZSV7 163 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PRUNE1Q86TP1 453 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 C17orf82Q86X59 251 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 GPSM1Q86YR5 675 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 BBS7Q8IWZ6 715 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ODF3L1Q8IXM7 274 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 IFT20Q8IY31 132 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PDIK1LQ8N165 341 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TTC29Q8NA56 475 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR2AK2Q8NG84 335 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR7A2PQ8NGA2 310 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR6M1Q8NGM8 313 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DCAKDQ8WVC6 231 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ESAMQ96AP7 390 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MCEEQ96PE7 176 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC1Q9BTT6 524 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SNRNP25Q9BV90 132 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC17A9Q9BYT1 436 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DHX35Q9H5Z1 703 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RDH14Q9HBH5 336 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FBXO8Q9NRD0 319 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM49BQ9NUQ9 324 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MED17Q9NVC6 651 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NLE1Q9NVX2 485 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 P4HTMQ9NXG6 502 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PTBP2Q9UKA9 531 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 POMT2Q9UKY4 750 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MAB21L2Q9Y586 359 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NBEAQ8NFP9 2946 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CHD5Q8TDI0 1954 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 BAZ2BQ9UIF8 2168 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM49BA6NDI0 452 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MGAT4DA6NG13 374 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PRR32B1ATL7 298 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 E9PBE3 544 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CASQ2O14958 399 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 STX7O15400 261 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 GLRA3O75311 464 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CREG1O75629 220 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SCGNO76038 276 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PDE9AO76083 593 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CATP04040 527 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CSN3P07498 182 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NUDT17P0C025 328 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM106CPP0CH98 169 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CTSEP14091 401 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MYOD1P15172 320 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PGAM1P18669 254 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RBMS1P29558 406 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SSTR2P30874 369 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CASP14P31944 242 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 GCKP35557 465 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MDH1P40925 334 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DNA2P51530 1060 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CCNHP51946 323 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 STX17P56962 302 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TMED1Q13445 227 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DPYSL3Q14195 570 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 GK3PQ14409 553 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PON2Q15165 354 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CA9Q16790 459 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 HSP90AA4PQ58FG1 418 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PAGE2BQ5JRK9 111 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 AGAP6Q5VW22 663 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF324BQ6AW86 544 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM225Q6GV28 225 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 UNQ6126/PRO20091Q6UXV3 157 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RAD9BQ6WBX8 426 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FCRLAQ7L513 359 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF571Q7Z3V5 609 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RBM23Q86U06 439 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC47A2Q86VL8 602 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NRROSQ86YC3 692 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC13A5Q86YT5 568 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TGIF2LXQ8IUE1 241 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LRRC8AQ8IWT6 810 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PYROXD2Q8N2H3 581 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MMGT1Q8N4V1 131 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OTUD6BQ8N6M0 293 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 KLHDC1Q8N7A1 406 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR11H4Q8NGC9 324 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms