RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 PTBP3O95758 552 aaKnown RBP2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 IFNB1P01574 187 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 LGALS2P05162 132 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 PPIAL4GP0DN37 164 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 HOXB8P17481 243 aaPredicted RBP2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 PAICSP22234 425 aaKnown RBP2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 TRIM23P36406 574 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 RPL4P36578 427 aaKnown RBP2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 HTR5AP47898 357 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 TDO2P48775 406 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 FNTAP49354 379 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 DSCR10P59022 87 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 KRTAP10-3P60369 221 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 LMO4P61968 165 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 ZIC1Q15915 447 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 CAMK4Q16566 473 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 CDKN3Q16667 212 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 TMEM44Q2T9K0 475 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 ADPRMQ3LIE5 342 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 USH1GQ495M9 461 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 SLC36A3Q495N2 470 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 DOPEY1Q5JWR5 2465 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 LGSNQ5TDP6 509 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 SLC25A42Q86VD7 318 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 SLC47A2Q86VL8 602 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 IFNEQ86WN2 208 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 Q8N377 158 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 FGFRL1Q8N441 504 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 ZSCAN4Q8NAM6 433 aaPredicted RBP2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 RLN3Q8WXF3 142 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 CRYGNQ8WXF5 182 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 MYLPFQ96A32 169 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 NTNG2Q96CW9 530 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 VPS39Q96JC1 886 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 TSGA13Q96PP4 275 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 RPP25Q9BUL9 199 aaKnown RBP2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 GSDMCQ9BYG8 508 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 COMMD4Q9H0A8 199 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 ZBP1Q9H171 429 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 RPS10P5Q9NQ39 176 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 TIGARQ9NQ88 270 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 PXMP2Q9NR77 195 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 AIPL1Q9NZN9 384 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 CYTH4Q9UIA0 394 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 LAMP5Q9UJQ1 280 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 BLOC1S6Q9UL45 172 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 PTPRQQ9UMZ3 2332 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 RNF24Q9Y225 148 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 KLHDC2Q9Y2U9 406 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 TLN1Q9Y490 2541 aaKnown RBP2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 COL6A6A6NMZ7 2263 aa2.89□□□□□ -1.95
PPP4R1-229ENST00000584754 NBASA2RRP1 2371 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 SPTBN1Q01082 2364 aaKnown RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 POLQO75417 2590 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 TMEM110-MUSTN1A8MSY1 372 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 E9PAM4 449 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 TM9SF1O15321 606 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 ADAM12O43184 909 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 TPST2O60704 377 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 GALR3O60755 368 aaPredicted RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 SMPD2O60906 423 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 KBTBD11O94819 623 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 OR4F21O95013 312 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 OAS1P00973 400 aaKnown RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 DCNP07585 359 aaKnown RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 HOXD4P09016 255 aaPredicted RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 CLUP10909 449 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 PDHBP11177 359 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 TOP1P11387 765 aaKnown RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 NCF1P14598 390 aaPredicted RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 ACADSP16219 412 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 SDC1P18827 310 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 CD52P31358 61 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 PTGFRP43088 359 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 SSR1P43307 286 aaKnown RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 ACADVLP49748 655 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 GSK3BP49841 420 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 ZNF85Q03923 595 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 OVGP1Q12889 678 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 CRMP1Q14194 572 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 C17orf58Q2M2W7 97 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 DNAJC21Q5F1R6 531 aaKnown RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 MS4A13Q5J8X5 152 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 ZSCAN25Q6NSZ9 544 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 SLC39A4Q6P5W5 647 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 RFWD3Q6PCD5 774 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 CBLN3Q6UW01 205 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 GCNT7Q6ZNI0 430 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 ANKRD37Q7Z713 158 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 TMEM110Q86TL2 294 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 SPAG16Q8N0X2 631 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 POM121L12Q8N7R1 296 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 RELL2Q8NC24 303 aaPredicted RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 ZNRF1Q8ND25 227 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 FNDC8Q8TC99 324 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 FRAT1Q92837 279 aaPredicted RBP2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 UPRTQ96BW1 309 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 TBC1D10AQ9BXI6 508 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 ADNPQ9H2P0 1102 aa2.88□□□□□ -1.95
PPP4R1-229ENST00000584754 CUTCQ9NTM9 273 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms