RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TNFRSF11BO00300 401 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 ZNF208O43345 1280 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 E2F6O75461 281 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 THY1P04216 161 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 RBM34P42696 430 aaKnown RBP16.54■□□□□ 0.24
RFFL-211ENST00000584541 GFRA1P56159 465 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 RAC1P63000 192 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 ATP6AP1Q15904 470 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 KRTCAP3Q53RY4 240 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 DCST1Q5T197 706 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 C5orf46Q6UWT4 87 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 TRILQ7L0X0 811 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 ATP6V1C2Q8NEY4 427 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 OR52J3Q8NH60 311 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 FAR1Q8WVX9 515 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 LRTOMTQ8WZ04 291 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 SNRNP40Q96DI7 357 aaKnown RBP16.54■□□□□ 0.24
RFFL-211ENST00000584541 PRSS27Q9BQR3 290 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 ZNF337Q9Y3M9 751 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 LIPGQ9Y5X9 500 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 TMEM72A0PK05 275 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 A8MVM7 634 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 LYPD3O95274 346 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 BAG2O95816 211 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 TFPIP10646 304 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 PEPDP12955 493 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 POU3F2P20265 443 aaPredicted RBP16.53■□□□□ 0.24
RFFL-211ENST00000584541 CLK1P49759 484 aaKnown RBP16.53■□□□□ 0.24
RFFL-211ENST00000584541 ARHGDIAP52565 204 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 LINC00114Q6XXX2 140 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 ZNF730Q6ZMV8 503 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 NKAIN4Q8IVV8 208 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 LILRA2Q8N149 483 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 GHDCQ8N2G8 530 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 STK35Q8TDR2 534 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 TMEM239Q8WW34 195 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 ACOT11Q8WXI4 607 aaPredicted RBP16.53■□□□□ 0.24
RFFL-211ENST00000584541 SMPDL3BQ92485 455 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 ABTB1Q969K4 478 aaPredicted RBP16.53■□□□□ 0.24
RFFL-211ENST00000584541 GPR137Q96N19 417 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 ALPK1Q96QP1 1244 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 EPYCQ99645 322 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 TMEM43Q9BTV4 400 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 DCLRE1BQ9H816 532 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 KRCC1Q9NPI7 259 aaPredicted RBP16.53■□□□□ 0.24
RFFL-211ENST00000584541 MAN2C1Q9NTJ4 1040 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 LYVE1Q9Y5Y7 322 aa16.53■□□□□ 0.24
RFFL-211ENST00000584541 A0A1B0GVC2 190 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 H0Y3Z8 333 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 AQP7O14520 342 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 BMP7P18075 431 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 DNAJA1P31689 397 aaKnown RBP16.52■□□□□ 0.24
RFFL-211ENST00000584541 HMGA2P52926 109 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 RCN1Q15293 331 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 SYT14P1Q58G82 188 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 NHSL2Q5HYW2 709 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 ZNF324BQ6AW86 544 aaPredicted RBP16.52■□□□□ 0.24
RFFL-211ENST00000584541 ARHGAP11AQ6P4F7 1023 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 WDR88Q6ZMY6 472 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 RNF113BQ8IZP6 322 aaKnown RBP16.52■□□□□ 0.24
RFFL-211ENST00000584541 LINC00471Q8N535 108 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 TMEM255BQ8WV15 326 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 SARAFQ96BY9 339 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 CENPNQ96H22 339 aaPredicted RBP16.52■□□□□ 0.24
RFFL-211ENST00000584541 SLC19A3Q9BZV2 496 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 KLHL4Q9C0H6 718 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 TMEM185BQ9H7F4 350 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 PLSCR2Q9NRY7 297 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 MED31Q9Y3C7 131 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 U3KQV3 271 aa16.52■□□□□ 0.24
RFFL-211ENST00000584541 ATMQ13315 3056 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 EFNA2O43921 213 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 WISP1O95388 367 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 IL11P20809 199 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 SFTPDP35247 375 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 EXOC3L2Q2M3D2 409 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 TMEM176BQ3YBM2 270 aaPredicted RBP16.51■□□□□ 0.23
RFFL-211ENST00000584541 PDSS1Q5T2R2 415 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 VASNQ6EMK4 673 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 PODNL1Q6PEZ8 512 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 AMIGO2Q86SJ2 522 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 PQLC1Q8N2U9 271 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 MEIOBQ8N635 442 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 SLC7A13Q8TCU3 470 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 PKP2Q99959 881 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 ZNF426Q9BUY5 554 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 ASF1BQ9NVP2 202 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 C6orf203Q9P0P8 240 aaPredicted RBP16.51■□□□□ 0.23
RFFL-211ENST00000584541 ZFYVE26Q68DK2 2539 aa16.51■□□□□ 0.23
RFFL-211ENST00000584541 ZNF407Q9C0G0 2248 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 A0A087WUU8 490 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 TRBV4-1A0A0J9YWV2 114 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 SH3PXD2BA1X283 911 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 HTR3EA5X5Y0 456 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 OR14I1A6ND48 311 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 CCNB2O95067 398 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 AHSA1O95433 338 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 PTNP21246 168 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 FPR1P21462 350 aa16.5■□□□□ 0.23
RFFL-211ENST00000584541 IFNGR2P38484 337 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms