RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 WDR31Q8NA23 367 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 CLHC1Q8NHS4 586 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 SGMS2Q8NHU3 365 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 OR5P2Q8WZ92 322 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 BHLHE41Q9C0J9 482 aaPredicted RBP11.68□□□□□ -0.54
COPS3-218ENST00000584216 RAB1BQ9H0U4 201 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 MOV10Q9HCE1 1003 aaKnown RBP11.68□□□□□ -0.54
COPS3-218ENST00000584216 OBP2BQ9NPH6 170 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 ACER3Q9NUN7 267 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 CHRNA9Q9UGM1 479 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 MOKQ9UQ07 419 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 PCDHB14Q9Y5E9 798 aa11.68□□□□□ -0.54
COPS3-218ENST00000584216 ESPNB1AK53 854 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 PDLIM1O00151 329 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 EIF1BO60739 113 aaKnown RBP11.67□□□□□ -0.54
COPS3-218ENST00000584216 CSTAP01040 98 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 ABHD2P08910 425 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 MAPK1P28482 360 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 MPGP29372 298 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 PPOXP50336 477 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 DNAJB13P59910 316 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 ABHD12BQ7Z5M8 362 aaPredicted RBP11.67□□□□□ -0.54
COPS3-218ENST00000584216 OR52E4Q8NGH9 312 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 ZNF563Q8TA94 476 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 PSMA8Q8TAA3 256 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 SFXN5Q8TD22 340 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 OIT3Q8WWZ8 545 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 IFT81Q8WYA0 676 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 KATNB1Q9BVA0 655 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 CA10Q9NS85 328 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 BAIAP2L1Q9UHR4 511 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 ATP6V1HQ9UI12 483 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
COPS3-218ENST00000584216 VSTM5A8MXK1 200 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 G3V2L1 256 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 SCAMP2O15127 329 aaKnown RBP11.66□□□□□ -0.54
COPS3-218ENST00000584216 GLRA3O75311 464 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 STX11O75558 287 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 CRYAAP02489 173 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 UBTFL6P0CB48 400 aaPredicted RBP11.66□□□□□ -0.54
COPS3-218ENST00000584216 EFNA1P20827 205 aaPredicted RBP11.66□□□□□ -0.54
COPS3-218ENST00000584216 GIFP27352 417 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 APEX1P27695 318 aaKnown RBP11.66□□□□□ -0.54
COPS3-218ENST00000584216 IDH3GP51553 393 aaPredicted RBP11.66□□□□□ -0.54
COPS3-218ENST00000584216 EFNB3Q15768 340 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 ZNF141Q15928 474 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 CCDC153Q494R4 210 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 RFTN2Q52LD8 501 aaPredicted RBP11.66□□□□□ -0.54
COPS3-218ENST00000584216 C9orf135Q5VTT2 229 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 CLEC6AQ6EIG7 209 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 GRINAQ7Z429 371 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 SPATA19Q7Z5L4 167 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.66□□□□□ -0.54
COPS3-218ENST00000584216 ANKS4BQ8N8V4 417 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 ZNF524Q96C55 264 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 C1orf159Q96HA4 380 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 SDF2Q99470 211 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
COPS3-218ENST00000584216 NAA11Q9BSU3 229 aaPredicted RBP11.66□□□□□ -0.54
COPS3-218ENST00000584216 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 GPATCH2Q9NW75 528 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 TRAPPC4Q9Y296 219 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 SLC35A3Q9Y2D2 325 aa11.66□□□□□ -0.54
COPS3-218ENST00000584216 FREM1Q5H8C1 2179 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 AZIN1O14977 448 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 LSM1O15116 133 aaKnown RBP11.65□□□□□ -0.54
COPS3-218ENST00000584216 URI1O94763 535 aaPredicted RBP11.65□□□□□ -0.54
COPS3-218ENST00000584216 STAMBPO95630 424 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 TACSTD2P09758 323 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 BCKDHAP12694 445 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 SLC1A3P43003 542 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 HTR3AP46098 478 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 OR2B6P58173 313 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 ACTG1P63261 375 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 SLC35A1P78382 337 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 GPR68Q15743 365 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 ZSWIM7Q19AV6 140 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 GALNTL6Q49A17 601 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 POMGNT2Q8NAT1 580 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.54
COPS3-218ENST00000584216 BOD1Q96IK1 185 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 SLC38A2Q96QD8 506 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 OR7D2Q96RA2 312 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 CCDC106Q9BWC9 280 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 SAP130Q9H0E3 1048 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 CTPS2Q9NRF8 586 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 SLC7A10Q9NS82 523 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 TMEM181Q9P2C4 612 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 PSMC3IPQ9P2W1 217 aaPredicted RBP11.65□□□□□ -0.54
COPS3-218ENST00000584216 PTGDR2Q9Y5Y4 395 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 KCNE3Q9Y6H6 103 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 ALPK2Q86TB3 2170 aa11.65□□□□□ -0.54
COPS3-218ENST00000584216 LRP5LA4QPB2 252 aa11.64□□□□□ -0.55
COPS3-218ENST00000584216 CFLARO15519 480 aa11.64□□□□□ -0.55
COPS3-218ENST00000584216 LYPLA1O75608 230 aaPredicted RBP11.64□□□□□ -0.55
COPS3-218ENST00000584216 OR4A8P0C604 315 aa11.64□□□□□ -0.55
COPS3-218ENST00000584216 LINC00032P0C843 101 aa11.64□□□□□ -0.55
COPS3-218ENST00000584216 DAOP14920 347 aa11.64□□□□□ -0.55
COPS3-218ENST00000584216 GCAP28676 217 aa11.64□□□□□ -0.55
COPS3-218ENST00000584216 NTF4P34130 210 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms