RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 HDAC3O15379 428 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 KLF4O43474 513 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 THBDP07204 575 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 ENPP1P22413 925 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 IL32P24001 234 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 FKBP2P26885 142 aaKnown RBP9.87□□□□□ -0.83
CCDC47-206ENST00000584112 APOBEC1P41238 236 aaKnown RBP9.87□□□□□ -0.83
CCDC47-206ENST00000584112 CASP9P55211 416 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 ATP5J2P56134 94 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 SESN3P58005 492 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 CSNK2A1P68400 391 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-206ENST00000584112 MERTKQ12866 999 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 GPAT3Q53EU6 434 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 AP1ARQ63HQ0 302 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 ATG16L1Q676U5 607 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 TYW3Q6IPR3 259 aaKnown RBP9.87□□□□□ -0.83
CCDC47-206ENST00000584112 TFAP2EQ6VUC0 442 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 C22orf34Q6ZV56 151 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 NUFIP2Q7Z417 695 aaKnown RBP9.87□□□□□ -0.83
CCDC47-206ENST00000584112 WFDC8Q8IUA0 241 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 TUSC5Q8IXB3 177 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 GABRG1Q8N1C3 465 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 FAM71CQ8NEG0 241 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 ZNF563Q8TA94 476 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 RAB3IL1Q8TBN0 382 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 RAB8BQ92930 207 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 CCDC115Q96NT0 180 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 PANX1Q96RD7 426 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 ZBTB18Q99592 522 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 SAP130Q9H0E3 1048 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 BCO1Q9HAY6 547 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 NGBQ9NPG2 151 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-206ENST00000584112 LIPT1Q9Y234 373 aa9.87□□□□□ -0.83
CCDC47-206ENST00000584112 CENPVL1A0A0U1RR11 272 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 A0A1W2PNR3 127 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 CYTIPO60759 359 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 TMCC2O75069 709 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 SNNO75324 88 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-206ENST00000584112 ERLIN1O75477 346 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 GCM2O75603 506 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-206ENST00000584112 ALDOCP09972 364 aaKnown RBP9.86□□□□□ -0.83
CCDC47-206ENST00000584112 ITGA2P17301 1181 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 LOXP28300 417 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-206ENST00000584112 EPHA3P29320 983 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 PGM1P36871 562 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 DIO1P49895 249 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 SLC18A1P54219 525 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 UFM1P61960 85 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 RASGEF1BQ0VAM2 473 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 P2RY6Q15077 328 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 MAPK14Q16539 360 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 SYT14P1Q58G82 188 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 SFRP5Q5T4F7 317 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 FRRS1Q6ZNA5 592 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 ZNF704Q6ZNC4 412 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-206ENST00000584112 PLEKHM3Q6ZWE6 761 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 OLIG3Q7RTU3 272 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 CMIPQ8IY22 773 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 ARFGAP2Q8N6H7 521 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 GLB1L3Q8NCI6 653 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-206ENST00000584112 KISS1RQ969F8 398 aaPredicted RBP9.86□□□□□ -0.83
CCDC47-206ENST00000584112 S100PBPQ96BU1 408 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 ZHX1-C8orf76Q96EF9 292 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 PLPPR2Q96GM1 343 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 OR52E6Q96RD3 313 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 PSD2Q9BQI7 771 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 QRSL1Q9H0R6 528 aaKnown RBP9.86□□□□□ -0.83
CCDC47-206ENST00000584112 EXOSC3Q9NQT5 275 aaKnown RBP9.86□□□□□ -0.83
CCDC47-206ENST00000584112 NKIRAS1Q9NYS0 192 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 LPAR3Q9UBY5 353 aa9.86□□□□□ -0.83
CCDC47-206ENST00000584112 IGHV3-15A0A0B4J1V0 119 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 CCDC154A6NI56 674 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 ZNF724A8MTY0 619 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 SULT2B1O00204 365 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 HMGN4O00479 90 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 DNPH1O43598 174 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 H6PDO95479 791 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 KRT75O95678 551 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 TFPIP10646 304 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 IDO1P14902 403 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 MAGEA8P43361 318 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 HTR3AP46098 478 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 OR3A2P47893 321 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 CLK1P49759 484 aaKnown RBP9.85□□□□□ -0.83
CCDC47-206ENST00000584112 NME5P56597 212 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 WDR4P57081 412 aaKnown RBP9.85□□□□□ -0.83
CCDC47-206ENST00000584112 KCNJ10P78508 379 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 FUT5Q11128 374 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 ITGADQ13349 1161 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 GNA13Q14344 377 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 NXNQ6DKJ4 435 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 LRRC74BQ6ZQY2 392 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 ZNF621Q6ZSS3 439 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 TMPPEQ6ZT21 453 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 Q6ZT83 130 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 SSX8Q7RTT4 187 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 GRINAQ7Z429 371 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 RNF130Q86XS8 419 aa9.85□□□□□ -0.83
CCDC47-206ENST00000584112 MGARPQ8TDB4 240 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms