RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 PLEKHB1Q9UF11 243 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KCNK6Q9Y257 313 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KCNE3Q9Y6H6 103 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HEATR5BQ9P2D3 2071 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZC3H12DA2A288 527 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FAM183AA6NL82 134 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF670-ZNF695F2Z2N8 137 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HMGN4O00479 90 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PGRMC2O15173 223 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC31A2O15432 143 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PLA2G10O15496 165 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GPX4P36969 197 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PGDP52209 483 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CTBP2P56545 445 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DUSP2Q05923 314 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HTR4Q13639 388 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 IL18Q14116 193 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CDK10Q15131 360 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PON3Q15166 354 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TMEM35AQ53FP2 167 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SAXO2Q658L1 398 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF776Q68DI1 518 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ASB18Q6ZVZ8 466 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TIPARPQ7Z3E1 657 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 AMZ2Q86W34 360 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NANOGP1Q8N7R0 232 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR4K5Q8NGD3 323 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HMGB4Q8WW32 186 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR1E3Q8WZA6 343 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KAT2AQ92830 837 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR2B2Q9GZK3 357 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MYNNQ9NPC7 610 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 IFT46Q9NQC8 304 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SHISA3A0PJX4 238 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C12orf71A8MTZ7 269 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 H0Y8X5 98 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CASKO14936 926 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 UGT2B17O75795 530 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC2A10O95528 541 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HOXB6P17509 224 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RAB4BP61018 213 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GPLD1P80108 840 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CDK3Q00526 305 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FABP5Q01469 135 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SCN1BQ07699 218 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MRPL49Q13405 166 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SYT14P1Q58G82 188 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FAM129CQ86XR2 697 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 YIPF7Q8N8F6 280 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 LINC01555Q8NAE3 123 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MTERF3Q96E29 417 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C16orf58Q96GQ5 468 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DPYSL5Q9BPU6 564 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FNDC11Q9BVV2 318 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HDAC8Q9BY41 377 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR51I1Q9H343 314 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CACNA1CQ13936 2221 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CPSF4LA6NMK7 179 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 EFCAB7A8K855 629 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ERVH48-1M5A8F1 160 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR1F1O43749 312 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FUT1P19526 365 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CELP19835 753 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C5AR1P21730 350 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 BSGP35613 385 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CCT3P49368 545 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FLI1Q01543 452 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SIGLEC14Q08ET2 396 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C1DQ13901 141 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FGL2Q14314 439 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TOR1AIP1Q5JTV8 583 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NDUFAF7Q7L592 441 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC44A3Q8N4M1 653 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR8K5Q8NH50 307 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C9orf43Q8TAL5 461 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DNAJA4Q8WW22 397 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC7A6Q92536 515 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZFYVE21Q9BQ24 234 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KATNB1Q9BVA0 655 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MND1Q9BWT6 205 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TMEM38AQ9H6F2 299 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SIRT3Q9NTG7 399 aaPredicted RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 IMP3Q9NV31 184 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 COA4Q9NYJ1 87 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CD207Q9UJ71 328 aa10.75□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HYKKA2RU49 373 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR52A4PA6NMU1 304 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 QSOX1O00391 747 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TCAPO15273 167 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 VAMP2P63027 116 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KRT33BQ14525 404 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TATDN3Q17R31 274 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 BTBD16Q32M84 506 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MRM1Q6IN84 353 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CNIH2Q6PI25 160 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C19orf48Q6RUI8 117 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 UBE3DQ7Z6J8 389 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NOXA1Q86UR1 476 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 LAPTM4BQ86VI4 370 aa10.74□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KLHDC8AQ8IYD2 350 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms