RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 AP3D1O14617 1153 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 DNPH1O43598 174 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 PMS2P2O95744 297 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 ENPP1P22413 925 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 ADSLP30566 484 aaPredicted RBP12.46□□□□□ -0.41
GGA3-215ENST00000582821 DIO1P49895 249 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 POLR2HP52434 150 aaKnown RBP12.46□□□□□ -0.41
GGA3-215ENST00000582821 CSNK2A1P68400 391 aaPredicted RBP12.46□□□□□ -0.41
GGA3-215ENST00000582821 CDK6Q00534 326 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 FAM27E3Q08E93 113 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 ADRM1Q16186 407 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 ZNF311Q5JNZ3 666 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 PPP4R4Q6NUP7 873 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 DHDDSQ86SQ9 333 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 LINC01560Q8TB33 94 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 ZNF317Q96PQ6 595 aaPredicted RBP12.46□□□□□ -0.41
GGA3-215ENST00000582821 OR5B2Q96R09 309 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 CGREF1Q99674 301 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 CPPED1Q9BRF8 314 aaPredicted RBP12.46□□□□□ -0.41
GGA3-215ENST00000582821 TACO1Q9BSH4 297 aaKnown RBP12.46□□□□□ -0.41
GGA3-215ENST00000582821 BCO1Q9HAY6 547 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 CACYBPQ9HB71 228 aaKnown RBP12.46□□□□□ -0.41
GGA3-215ENST00000582821 KLHL14Q9P2G3 628 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.46□□□□□ -0.41
GGA3-215ENST00000582821 NDRG3Q9UGV2 375 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 CLEC4AQ9UMR7 237 aa12.46□□□□□ -0.41
GGA3-215ENST00000582821 HRNRQ86YZ3 2850 aaPredicted RBP12.45□□□□□ -0.42
GGA3-215ENST00000582821 TMED7-TICAM2A0A0A6YYA0 188 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 A6NNC1 897 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 SULT2B1O00204 365 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 CYTIPO60759 359 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 NPPAP01160 153 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 YES1P07947 543 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 GKN3PP0CG01 181 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 SLC6A2P23975 617 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 TACR3P29371 465 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 AGTR1P30556 359 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 PRKAR1BP31321 381 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 RBBP4Q09028 425 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 PDK3Q15120 406 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 COQ5Q5HYK3 327 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 TMEM201Q5SNT2 666 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 MTDHQ86UE4 582 aaKnown RBP12.45□□□□□ -0.42
GGA3-215ENST00000582821 ABHD3Q8WU67 409 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 ARL5BQ96KC2 179 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 SPATA5L1Q9BVQ7 753 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 RSPO3Q9BXY4 272 aaPredicted RBP12.45□□□□□ -0.42
GGA3-215ENST00000582821 SAR1AQ9NR31 198 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 RASSF1Q9NS23 344 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 KLHL9Q9P2J3 617 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 KLHL13Q9P2N7 655 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 ING1Q9UK53 422 aaPredicted RBP12.45□□□□□ -0.42
GGA3-215ENST00000582821 TMED7Q9Y3B3 224 aa12.45□□□□□ -0.42
GGA3-215ENST00000582821 OTOGQ6ZRI0 2925 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 SH3D21A4FU49 640 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 ZNF724A8MTY0 619 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 C16orf97H3BN30 126 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 FBP2O00757 339 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 SMAD9O15198 467 aaKnown RBP12.44□□□□□ -0.42
GGA3-215ENST00000582821 SLC22A2O15244 555 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 TFPIP10646 304 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 POU2F1P14859 743 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 UGT2B10P36537 528 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 COPZ1P61923 177 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 H3F3AP84243 136 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 KLF10Q13118 480 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 NFYCQ13952 458 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 SCARB2Q14108 478 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 WBP2NLQ6ICG8 309 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 DHRS4L2Q6PKH6 230 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 BEND4Q6ZU67 534 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 NET1Q7Z628 596 aaPredicted RBP12.44□□□□□ -0.42
GGA3-215ENST00000582821 KRT73Q86Y46 540 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 TUSC5Q8IXB3 177 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 HIPK4Q8NE63 616 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 BHLHE22Q8NFJ8 381 aaPredicted RBP12.44□□□□□ -0.42
GGA3-215ENST00000582821 NFKBIDQ8NI38 313 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 DDIT4LQ96D03 193 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 ZNF607Q96SK3 696 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 PSD2Q9BQI7 771 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 POTEKPQ9BYX7 375 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 KAT8Q9H7Z6 458 aaKnown RBP12.44□□□□□ -0.42
GGA3-215ENST00000582821 FANCFQ9NPI8 374 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 TMEM181Q9P2C4 612 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 TESMINQ9Y4I5 508 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 ROS1P08922 2347 aa12.44□□□□□ -0.42
GGA3-215ENST00000582821 IGKV3D-15A0A087WSY6 115 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 TMEM72A0PK05 275 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 SERPINB7O75635 380 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 PRG2P13727 222 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 CXCR1P25024 350 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 CPOXP36551 454 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 RASGEF1BQ0VAM2 473 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 CYLC2Q14093 348 aaPredicted RBP12.43□□□□□ -0.42
GGA3-215ENST00000582821 MAPRE2Q15555 327 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 NUFIP2Q7Z417 695 aaKnown RBP12.43□□□□□ -0.42
GGA3-215ENST00000582821 SERPINA11Q86U17 422 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 STK32CQ86UX6 486 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 TMEM200AQ86VY9 491 aa12.43□□□□□ -0.42
GGA3-215ENST00000582821 PTOV1Q86YD1 416 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms