RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SH3BP4Q9P0V3 963 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 CARD8Q9Y2G2 431 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 PLCE1Q9P212 2302 aa11.98□□□□□ -0.49
SS18-222ENST00000582792 YLPM1P49750 1951 aaKnown RBP11.98□□□□□ -0.49
SS18-222ENST00000582792 OR5H1A6NKK0 313 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 H3BNH8 94 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 CYTIPO60759 359 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 PGM3O95394 542 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 SLC25A16P16260 332 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 GGT1P19440 569 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 IGHV1-2P23083 117 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 EDNRAP25101 427 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 SLC7A1P30825 629 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 TTKP33981 857 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 CASP9P55211 416 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 RASGEF1BQ0VAM2 473 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 SELENBP1Q13228 472 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 TOMM34Q15785 309 aaPredicted RBP11.97□□□□□ -0.49
SS18-222ENST00000582792 SLC25A53Q5H9E4 307 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 ZNF527Q8NB42 609 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 GPR119Q8TDV5 335 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 CDS1Q92903 461 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 FAM120BQ96EK7 910 aaKnown RBP11.97□□□□□ -0.49
SS18-222ENST00000582792 CHMP6Q96FZ7 201 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 STACQ99469 402 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 EBF4Q9BQW3 602 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 HOXD1Q9GZZ0 328 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 PIGUQ9H490 435 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 NPHS2Q9NP85 383 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 CBLN4Q9NTU7 201 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 ZCCHC3Q9NUD5 404 aaKnown RBP11.97□□□□□ -0.49
SS18-222ENST00000582792 GIN1Q9NXP7 522 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 KLHL14Q9P2G3 628 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 LPAR3Q9UBY5 353 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 TRIM33Q9UPN9 1127 aa11.97□□□□□ -0.49
SS18-222ENST00000582792 A0A1W2PNR3 127 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 ZNF724A8MTY0 619 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 C9JVG2 144 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 E7EQL1 145 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 RNASET2O00584 256 aaKnown RBP11.96□□□□□ -0.49
SS18-222ENST00000582792 SMAD9O15198 467 aaKnown RBP11.96□□□□□ -0.49
SS18-222ENST00000582792 HMGN2P05204 90 aaKnown RBP11.96□□□□□ -0.49
SS18-222ENST00000582792 LAMP1P11279 417 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 ATP6V1C1P21283 382 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 THBS2P35442 1172 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 RNF144AP50876 292 aaPredicted RBP11.96□□□□□ -0.49
SS18-222ENST00000582792 STX1BP61266 288 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 LRRC74AQ0VAA2 488 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 LASP1Q14847 261 aaKnown RBP11.96□□□□□ -0.49
SS18-222ENST00000582792 NDUFAF6Q330K2 333 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.96□□□□□ -0.49
SS18-222ENST00000582792 ANXA8L1Q5VT79 327 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 CGB2Q6NT52 195 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 TMEM108Q6UXF1 575 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 MIER2Q8N344 545 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 KRTCAP2Q8N6L1 136 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 ZNF525Q8N782 197 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 ZNF433Q8N7K0 673 aaPredicted RBP11.96□□□□□ -0.49
SS18-222ENST00000582792 OR7A2PQ8NGA2 310 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 RFWD2Q8NHY2 731 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 PSMA8Q8TAA3 256 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 OR5P2Q8WZ92 322 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 ZNF775Q96BV0 537 aaPredicted RBP11.96□□□□□ -0.49
SS18-222ENST00000582792 ZNF524Q96C55 264 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 ZNF300Q96RE9 604 aaPredicted RBP11.96□□□□□ -0.49
SS18-222ENST00000582792 ZBTB18Q99592 522 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 DHRS9Q9BPW9 319 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 DUSP26Q9BV47 211 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 AMBRA1Q9C0C7 1298 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 SIRT3Q9NTG7 399 aaPredicted RBP11.96□□□□□ -0.49
SS18-222ENST00000582792 MGAT4BQ9UQ53 548 aa11.96□□□□□ -0.49
SS18-222ENST00000582792 SVEP1Q4LDE5 3571 aa11.96□□□□□ -0.5
SS18-222ENST00000582792 NPIPA5A0A0B4J1W7 369 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 E9PBE3 544 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 NPIPA7E9PJI5 369 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 H7C417 338 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 GTPBP1O00178 669 aaKnown RBP11.95□□□□□ -0.5
SS18-222ENST00000582792 ETV2O00321 342 aaPredicted RBP11.95□□□□□ -0.5
SS18-222ENST00000582792 SLC22A3O75751 556 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 NPIPA8P0DM63 369 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 EFNA1P20827 205 aaPredicted RBP11.95□□□□□ -0.5
SS18-222ENST00000582792 LSP1P33241 339 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 ARFIP2P53365 341 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 ATP12AP54707 1039 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 UFM1P61960 85 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 RAB35Q15286 201 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 DCST2Q5T1A1 773 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 CYB5R2Q6BCY4 276 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 CDC73Q6P1J9 531 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 C3orf33Q6P1S2 294 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 MSANTD1Q6ZTZ1 278 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 GALNT5Q7Z7M9 940 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 ZNF100Q8IYN0 542 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 FBXL14Q8N1E6 418 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 MUC15Q8N387 334 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 VPS37AQ8NEZ2 397 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 OR5W2Q8NH69 310 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 FAM168AQ92567 244 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 HTRA1Q92743 480 aa11.95□□□□□ -0.5
SS18-222ENST00000582792 SHARPINQ9H0F6 387 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms