RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 GADD45GO95257 159 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 CHRM4P08173 479 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 PABPC4LP0CB38 370 aaKnown RBP9.35□□□□□ -0.91
SS18-221ENST00000582448 UBTFL6P0CB48 400 aaPredicted RBP9.35□□□□□ -0.91
SS18-221ENST00000582448 ANXA8P13928 327 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 IL7RP16871 459 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 IGFBP5P24593 272 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 PRKAR1BP31321 381 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 GABRA3P34903 492 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 CA7P43166 264 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 TNFSF10P50591 281 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 RPS6KA3P51812 740 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 CRYBA2P53672 197 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 IST1P53990 364 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 CDH12P55289 794 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 BTG2P78543 158 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 IL1RL1Q01638 556 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 EXOSC7Q15024 291 aaKnown RBP9.35□□□□□ -0.91
SS18-221ENST00000582448 DUSP5Q16690 384 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 DUSP7Q16829 419 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 ZSWIM7Q19AV6 140 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 LIN52Q52LA3 116 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 DCST2Q5T1A1 773 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 XKRXQ6PP77 449 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 DEF8Q6ZN54 512 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 QSOX2Q6ZRP7 698 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 LINC00471Q8N535 108 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 AMER2Q8N7J2 671 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 CHDHQ8NE62 594 aaPredicted RBP9.35□□□□□ -0.91
SS18-221ENST00000582448 OR7G1Q8NGA0 311 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 OR52P1PQ8NH57 321 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 VANGL1Q8TAA9 524 aaPredicted RBP9.35□□□□□ -0.91
SS18-221ENST00000582448 STT3BQ8TCJ2 826 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 GIPC3Q8TF64 312 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 CTHRC1Q96CG8 243 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 ANKRA2Q9H9E1 313 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 PNO1Q9NRX1 252 aaKnown RBP9.35□□□□□ -0.91
SS18-221ENST00000582448 KRT84Q9NSB2 600 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 PNPLA3Q9NST1 481 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 C14orf105Q9NVL8 296 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 MRTO4Q9UKD2 239 aaKnown RBP9.35□□□□□ -0.91
SS18-221ENST00000582448 CLCA3PQ9Y6N3 262 aa9.35□□□□□ -0.91
SS18-221ENST00000582448 DOCK10Q96BY6 2186 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 SH3D21A4FU49 640 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 VSTM2BA6NLU5 285 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 C17orf105B2RV13 164 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 AP3D1O14617 1153 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 CCNB2O95067 398 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 NKX2-2O95096 273 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 WDPCPO95876 746 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 CRYABP02511 175 aaKnown RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 DBIP07108 87 aaKnown RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 LYNP07948 512 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 CELA2AP08217 269 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 ACP2P11117 423 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 TNFRSF1BP20333 461 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 MYF6P23409 242 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 SSTR2P30874 369 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 YAP1P46937 504 aaKnown RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 SMSP52788 366 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 EMP2P54851 167 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 PSMD4P55036 377 aaKnown RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 PPP2R2BQ00005 443 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 PMP22Q01453 160 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 MGAT2Q10469 447 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 IL18R1Q13478 541 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 ELAVL1Q15717 326 aaKnown RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 NSDHLQ15738 373 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 C3AR1Q16581 482 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 ZIK1Q3SY52 487 aaPredicted RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 SLC36A3Q495N2 470 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 FGD3Q5JSP0 725 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 TMEM154Q6P9G4 183 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 TTC33Q6PID6 262 aaPredicted RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 DHRS4L2Q6PKH6 230 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 CHERPQ8IWX8 916 aaKnown RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 ZNF619Q8N2I2 560 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 SETD9Q8NE22 299 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 METTL21AQ8WXB1 218 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 HAS2Q92819 552 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 DAZLQ92904 295 aaKnown RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 LMF2Q9BU23 707 aaKnown RBP9.34□□□□□ -0.91
SS18-221ENST00000582448 FNDC11Q9BVV2 318 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 AMBRA1Q9C0C7 1298 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 SLC26A1Q9H2B4 701 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 SLC38A1Q9H2H9 487 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 CDIP1Q9H305 208 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 SMURF2Q9HAU4 748 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 FOLH1BQ9HBA9 442 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 COPS7AQ9UBW8 275 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 TINAGQ9UJW2 476 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 OR10H1Q9Y4A9 318 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 KCNE3Q9Y6H6 103 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 AKAP9Q99996 3911 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 OTOGQ6ZRI0 2925 aa9.34□□□□□ -0.91
SS18-221ENST00000582448 ZFHX3Q15911 3703 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 DSPPQ9NZW4 1301 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 PRODHO43272 600 aa9.33□□□□□ -0.92
SS18-221ENST00000582448 NADKO95544 446 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms