RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 BTDP43251 543 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 PLK1P53350 603 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 ACTR1AP61163 376 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 GPM6BQ13491 265 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 LRRC23Q53EV4 343 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 BEND3Q5T5X7 828 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 WDR74Q6RFH5 385 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 FAM43BQ6ZT52 329 aaPredicted RBP3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 ACOT7LQ6ZUV0 252 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 FAM220AQ7Z4H9 259 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 CCDC50Q8IVM0 306 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 SLC35F2Q8IXU6 374 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 ZNF100Q8IYN0 542 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 TMEM252Q8N6L7 170 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 BBS1Q8NFJ9 593 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 OR9A1PQ8NGU1 263 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 PHYHIPLQ96FC7 376 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 PGLYRP4Q96LB8 373 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 SMIM14Q96QK8 99 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 TBX15Q96SF7 602 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 KLHDC3Q9BQ90 382 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 APMAPQ9HDC9 416 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 NUDT15Q9NV35 164 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 MARCH5Q9NX47 278 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 CLEC4AQ9UMR7 237 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 TIMM10BQ9Y5J6 103 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 A0A0G2JRQ6 117 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 PFKFB2O60825 505 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 TIMP1P01033 207 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 IGHV3-48P01763 117 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 HSMCR30P0CW71 290 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 RBMY1CP0DJD4 496 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 HMGB2P26583 209 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 RBMXP38159 391 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 HNRNPA3P51991 378 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 LYZP61626 148 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 RPS14P62263 151 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 FGL1Q08830 312 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 IL24Q13007 206 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 CHIT1Q13231 466 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 ARL6IP1Q15041 203 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 PDK3Q15120 406 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 ZSCAN25Q6NSZ9 544 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 CASC1Q6TDU7 716 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 UNQ9370/PRO34162Q6UXP9 181 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 VRK2Q86Y07 508 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 OR2L13Q8N349 312 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 OR2L5Q8NG80 312 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 OR52I1Q8NGK6 324 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 FBXO30Q8TB52 745 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 EFHD2Q96C19 240 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 NUS1Q96E22 293 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 PLEKHF1Q96S99 279 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 MAGT1Q9H0U3 335 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 SMOXQ9NWM0 555 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 C6orf203Q9P0P8 240 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 PRPF19Q9UMS4 504 aaKnown RBP3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 CELA1Q9UNI1 258 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 ZNF256Q9Y2P7 627 aaPredicted RBP3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 POLDIP2Q9Y2S7 368 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 IFT52Q9Y366 437 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 SLCO1B1Q9Y6L6 691 aa3.3□□□□□ -1.88
SMCHD1-205ENST00000581383 FAM231BA6NCW3 169 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 TRDCB7Z8K6 153 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 F5H6K3 240 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 RGS16O15492 202 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 ZNF208O43345 1280 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 SCGNO76038 276 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 LGALS2P05162 132 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 CCDC130P13994 396 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 NCK1P16333 377 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 CASP4P49662 377 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 KLRC3Q07444 240 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 EXOC3L2Q2M3D2 409 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 NSUN5P1Q3KNT7 163 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 OR4F3Q6IEY1 312 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 NLRP9Q7RTR0 991 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 CCDC65Q8IXS2 484 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 SLC34A3Q8N130 599 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 OR2AP1Q8NGE2 309 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 LINC01006Q8NI28 216 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 ST8SIA1Q92185 356 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 ZIM3Q96PE6 472 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 RBM14Q96PK6 669 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 PSKH2Q96QS6 385 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 CCNL2Q96S94 520 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 NPAS2Q99743 824 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 CCT7Q99832 543 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 TMEM43Q9BTV4 400 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 OR51J1Q9H342 316 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 VCPKMTQ9H867 229 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 POLE4Q9NR33 117 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 TREM2Q9NZC2 230 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 DCDC2Q9UHG0 476 aa3.29□□□□□ -1.88
SMCHD1-205ENST00000581383 PNPLA6Q8IY17 1366 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 TRAV26-1A0A087WT03 109 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 POLR2DO15514 142 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 RIPK2O43353 540 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 MMP23AO75900 390 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 DIRAS1O95057 198 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms