RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 D6RAR5 112 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 HOXA9P31269 272 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 ETV5P41161 510 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 ACY1Q03154 408 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 NFATC4Q14934 902 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 MAMDC4Q6UXC1 1216 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 MRPL10Q7Z7H8 261 aaKnown RBP13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 SCD5Q86SK9 330 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 PRR22Q8IZ63 422 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 FBXO7Q9Y3I1 522 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 LOC102725191A0A1B0GVB3 256 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 A0A1W2PPV4 95 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 PTGESO14684 152 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 AP1G1O43747 822 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 DEFB110Q30KQ9 67 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 EXOSC6Q5RKV6 272 aaKnown RBP13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 HSD11B1LQ7Z5J1 315 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 RNF113BQ8IZP6 322 aaKnown RBP13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 DUSP19Q8WTR2 217 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 TAAR8Q969N4 342 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 C20orf27Q9GZN8 174 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 TCEAL2Q9H3H9 227 aaPredicted RBP13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 ENTPD2Q9Y5L3 495 aa13.6□□□□□ -0.23
CSNK1D-217ENST00000581241 PPP6CO00743 305 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 SNRPBP14678 240 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 JUNBP17275 347 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 IDUAP35475 653 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 LYSMD2Q8IV50 215 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 OR4K15Q8NH41 348 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 CPEB1Q9BZB8 566 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 ELOVL3Q9HB03 270 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 FAM212BQ9NTI7 297 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 GNG13Q9P2W3 67 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 COL2A1P02458 1487 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 C1orf105O95561 183 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 IL4RP24394 825 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 GAB1Q13480 694 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 MPEG1Q2M385 716 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 ZFP82Q8N141 532 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 RSPRY1Q96DX4 576 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 TXN2Q99757 166 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 CENPOQ9BU64 300 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 C20orf85Q9H1P6 137 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 NIPAL2Q9H841 368 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 SLAMF8Q9P0V8 285 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 DIMT1Q9UNQ2 313 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 FAM183AA6NL82 134 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 MEIS3P2A8K0S8 358 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 TOR1AO14656 332 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 ACTL6BO94805 426 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 PTHP01270 115 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 ABHD12BQ7Z5M8 362 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 HCAR1Q9BXC0 346 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 VSX1Q9NZR4 365 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 CBLCQ9ULV8 474 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 SIGLEC1Q9BZZ2 1709 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 OR2T1O43869 369 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 GPRIN2O60269 458 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 KCNK2O95069 426 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 ITGB2P05107 769 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 MSR1P21757 451 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 CSNK1DP48730 415 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 SFXN4Q6P4A7 337 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 LILRA2Q8N149 483 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 ZNF454Q8N9F8 522 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 LRRC46Q96FV0 321 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 TIAM2Q8IVF5 1701 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 TMEM212A6NML5 194 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 H3BML4 177 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 RFXAPO00287 272 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 Q6ZPB1 254 aaPredicted RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 PIANPQ8IYJ0 282 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 OR8J2Q8NGG1 315 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 ST7LQ8TDW4 575 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 ISG20Q96AZ6 181 aaKnown RBP13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 OLAHQ9NV23 265 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 USP22Q9UPT9 525 aa13.59□□□□□ -0.23
CSNK1D-217ENST00000581241 A0A0U1RQS6 177 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 PRAMEF27A3QJZ7 478 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 CSNK1A1P48729 337 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 ETV1P50549 477 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 KIR2DS3Q14952 304 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 PLGLAQ15195 96 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 PRAMEF9Q5VWM5 478 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 TMEM25Q86YD3 366 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 PNPLA1Q8N8W4 532 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 C11orf54Q9H0W9 315 aaPredicted RBP13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 CHRDQ9H2X0 955 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 ZNF286AQ9HBT8 521 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 FBXL2Q9UKC9 423 aa13.58□□□□□ -0.23
CSNK1D-217ENST00000581241 SMLR1H3BR10 107 aa13.58□□□□□ -0.24
CSNK1D-217ENST00000581241 AIPO00170 330 aa13.58□□□□□ -0.24
CSNK1D-217ENST00000581241 PSMB1P20618 241 aaKnown RBP13.58□□□□□ -0.24
CSNK1D-217ENST00000581241 CCR7P32248 378 aa13.58□□□□□ -0.24
CSNK1D-217ENST00000581241 SFTPDP35247 375 aa13.58□□□□□ -0.24
CSNK1D-217ENST00000581241 EMP2P54851 167 aa13.58□□□□□ -0.24
CSNK1D-217ENST00000581241 ZNF542PQ5EBM4 170 aa13.58□□□□□ -0.24
CSNK1D-217ENST00000581241 LSMEM2Q8N112 164 aa13.58□□□□□ -0.24
CSNK1D-217ENST00000581241 FAM160A2Q8N612 972 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-217ENST00000581241 OR2T11Q8NH01 316 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms