RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 COL5A1P20908 1838 aaPredicted RBP11.65□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LINC00854A0A1B0GVQ3 168 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ANKRD34BA5PLL1 514 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RGS13O14921 159 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 DYRK3O43781 588 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF354AO60765 605 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ADAM11O75078 769 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GPX5O75715 221 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CH25HO95992 272 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TP53P04637 393 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 FTH1P19P0C7X4 201 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PRKAR1BP31321 381 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 IFNGR2P38484 337 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GPR4P46093 362 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GIPRP48546 466 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SNRPGP62308 76 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 MXD1Q05195 221 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF91Q05481 1191 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 EBPQ15125 230 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF181Q2M3W8 571 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 C1orf94Q6P1W5 598 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SPATC1Q76KD6 591 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LINC00471Q8N535 108 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 APCDD1LQ8NCL9 501 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CRELD1Q96HD1 420 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ADOQ96SZ5 270 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ARHGDIGQ99819 225 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PELOQ9BRX2 385 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CARD8Q9Y2G2 431 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GMFGO60234 142 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TCN2P20062 427 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SMSP52788 366 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SHFQ7M4L6 423 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR5M3Q8NGP4 307 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 C9orf43Q8TAL5 461 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 C14orf105Q9NVL8 296 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ERVK13-1Q9NX77 482 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PRODH2Q9UF12 536 aa11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GPN3Q9UHW5 284 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RPL36Q9Y3U8 105 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GSTM3P21266 225 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GALNSP34059 522 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 EEF1A1P68104 462 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NCF4Q15080 339 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF517Q6ZMY9 492 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF367Q7RTV3 350 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CPEB2Q7Z5Q1 589 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 KIF18BQ86Y91 864 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NRMQ8IXM6 262 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PARP16Q8N5Y8 322 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NFAM1Q8NET5 270 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR7G1Q8NGA0 311 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OR14A16Q8NHC5 309 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PIGXQ8TBF5 258 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TMEM255BQ8WV15 326 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CNOT9Q92600 299 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 DIO2Q92813 273 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC41A3Q96GZ6 507 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TMEM80Q96HE8 168 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC46A1Q96NT5 459 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TAAR9Q96RI9 348 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 CDCA4Q9BXL8 241 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 RTN4RQ9BZR6 473 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SAP130Q9H0E3 1048 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NEK6Q9HC98 313 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LUZP4Q9P127 313 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 COPS7AQ9UBW8 275 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PADI1Q9ULC6 663 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC7A7Q9UM01 511 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 LRP3O75074 770 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ONECUT2O95948 504 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SCGB1D2O95969 90 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 F8A1P23610 371 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 COPZ1P61923 177 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 IRF3Q14653 427 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TMEM95Q3KNT9 176 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC27A4Q6P1M0 643 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 APOOLQ6UXV4 268 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ATCAYQ86WG3 371 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 GNPDA2Q8TDQ7 276 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 OTULINQ96BN8 352 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 ZNF578Q96N58 590 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 KLHDC3Q9BQ90 382 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 WWTR1Q9GZV5 400 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC26A1Q9H2B4 701 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC25A19Q9HC21 320 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 YARS2Q9Y2Z4 477 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 UGT2A1Q9Y4X1 527 aa11.63□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SAGE2PA6NJ88 616 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TAF4O00268 1085 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 REM1O75628 298 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 TNFSF15O95150 251 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PTTG1O95997 202 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 THY1P04216 161 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 NID1P14543 1247 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 PPICP45877 212 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 BIKQ13323 160 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SYT14P1Q58G82 188 aa11.62□□□□□ -0.55
CDK5RAP3-217ENST00000580287 SLC30A6Q6NXT4 461 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms