RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 ZNF300Q96RE9 604 aaPredicted RBP10.23□□□□□ -0.77
SSH2-208ENST00000579040 SLC38A1Q9H2H9 487 aa10.23□□□□□ -0.77
SSH2-208ENST00000579040 WDR55Q9H6Y2 383 aaPredicted RBP10.23□□□□□ -0.77
SSH2-208ENST00000579040 MTHFD2LQ9H903 347 aaPredicted RBP10.23□□□□□ -0.77
SSH2-208ENST00000579040 CTPS2Q9NRF8 586 aa10.23□□□□□ -0.77
SSH2-208ENST00000579040 ZNF701Q9NV72 531 aaPredicted RBP10.23□□□□□ -0.77
SSH2-208ENST00000579040 NKIRAS1Q9NYS0 192 aa10.23□□□□□ -0.77
SSH2-208ENST00000579040 ZFHX3Q15911 3703 aa10.23□□□□□ -0.77
SSH2-208ENST00000579040 CSPG4Q6UVK1 2322 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 GOLGA8QA0A0J9YX86 632 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 GOLGA8OA6NCC3 632 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 GOLGA8NF8WBI6 632 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 RFXANKO14593 260 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 GPR171O14626 319 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 BCAS1O75363 584 aaPredicted RBP10.22□□□□□ -0.77
SSH2-208ENST00000579040 ERLIN1O75477 346 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 HEXAP06865 529 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 CD3EP07766 207 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 CHRM4P08173 479 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 UQCRBP14927 111 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 CDKN2CP42773 168 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 SLC16A1P53985 500 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 PLAURQ03405 335 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 TSC22D1Q15714 1073 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 SYPL1Q16563 259 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 GSTA3Q16772 222 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 CLEC9AQ6UXN8 241 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 ZNF621Q6ZSS3 439 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 MSANTD1Q6ZTZ1 278 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 P2RY8Q86VZ1 359 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 ADGRG3Q86Y34 549 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 ZNF440Q8IYI8 595 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 ZNF100Q8IYN0 542 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 ANKFN1Q8N957 763 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 PIWIL2Q8TC59 973 aaKnown RBP10.22□□□□□ -0.77
SSH2-208ENST00000579040 WDR60Q8WVS4 1066 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 CNOT9Q92600 299 aaKnown RBP10.22□□□□□ -0.77
SSH2-208ENST00000579040 AKAP1Q92667 903 aaKnown RBP eCLIP10.22□□□□□ -0.77
SSH2-208ENST00000579040 TLCD1Q96CP7 247 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 INPP5KQ9BT40 448 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 MANSC1Q9H8J5 431 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 CALML5Q9NZT1 146 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 ZIM2Q9NZV7 527 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 TRAPPC4Q9Y296 219 aa10.22□□□□□ -0.77
SSH2-208ENST00000579040 ZNF469Q96JG9 3925 aaPredicted RBP10.22□□□□□ -0.77
SSH2-208ENST00000579040 ABCA2Q9BZC7 2435 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 CLDN24A6NM45 220 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 ZNF716A6NP11 495 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 C9JVG2 144 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 H7C1Q1 480 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 KLF11O14901 512 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 ZNF208O43345 1280 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 SLC22A3O75751 556 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 LYZL6O75951 148 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 DBIP07108 87 aaKnown RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 ZCCHC18P0CG32 403 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 NR2F1P10589 423 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 KITP10721 976 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 IL7RP16871 459 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 IDH2P48735 452 aaKnown RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 POLR2HP52434 150 aaKnown RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 MAGOHP61326 146 aaKnown RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 RPS4XP62701 263 aaKnown RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 LTBQ06643 244 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 CAPRIN1Q14444 709 aaKnown RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 COX20Q5RI15 118 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 TIMM23BQ5SRD1 257 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 NXNQ6DKJ4 435 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 ALKBH2Q6NS38 261 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 SEZ6L2Q6UXD5 910 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 DNAJC14Q6Y2X3 702 aaPredicted RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 PEX5LQ8IYB4 626 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 MGARPQ8TDB4 240 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 FBXW5Q969U6 566 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 DDIT4LQ96D03 193 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 MUCL1Q96DR8 90 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 ARL5BQ96KC2 179 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 SMR3AQ99954 134 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 RMND5AQ9H871 391 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 SDR39U1Q9NRG7 319 aaPredicted RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 THUMPD1Q9NXG2 353 aaKnown RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 TMEM181Q9P2C4 612 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 P2RX2Q9UBL9 471 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 PRSS50Q9UI38 385 aa10.21□□□□□ -0.77
SSH2-208ENST00000579040 NOSIPQ9Y314 301 aaKnown RBP10.21□□□□□ -0.77
SSH2-208ENST00000579040 FN1P02751 2386 aaKnown RBP10.21□□□□□ -0.78
SSH2-208ENST00000579040 HIVEP2P31629 2446 aa10.21□□□□□ -0.78
SSH2-208ENST00000579040 TMED7-TICAM2A0A0A6YYA0 188 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 CFAP73A6NFT4 308 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 CLOCKO15516 846 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 EIF1BO60739 113 aaKnown RBP10.2□□□□□ -0.78
SSH2-208ENST00000579040 ADAM11O75078 769 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 PGM3O95394 542 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 C1QCP02747 245 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 GSNP06396 782 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 GGT1P19440 569 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 IGHV1-2P23083 117 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 EDNRAP25101 427 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 SLC1A3P43003 542 aa10.2□□□□□ -0.78
SSH2-208ENST00000579040 MVDP53602 400 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms