RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 VRK2Q86Y07 508 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 C19orf18Q8NEA5 215 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 DIRAS2Q96HU8 199 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 MTHFD2LQ9H903 347 aaPredicted RBP12.74□□□□□ -0.37
RNF43-202ENST00000577625 ABCB9Q9NP78 766 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 CUTCQ9NTM9 273 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 WDR45Q9Y484 360 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 FRYLO94915 3013 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 FAM240BA0A1B0GVZ2 78 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 H0YIG0 161 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 OR10H2O60403 315 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 CTNSO60931 367 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 CBX7O95931 251 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 CFIP05156 583 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 POU2F1P14859 743 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 GCGRP47871 477 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 ARL4DP49703 201 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 BLVRAP53004 296 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 BTG2P78543 158 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 FLI1Q01543 452 aaPredicted RBP12.74□□□□□ -0.37
RNF43-202ENST00000577625 MAP4K2Q12851 820 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 DUSP8Q13202 625 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 SEC23BQ15437 767 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 MED22Q15528 200 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 SSX1Q16384 188 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 GUSBP11Q6P575 273 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 OR52P1PQ8NH57 321 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 OR51Q1Q8NH59 317 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 OR1L3Q8NH93 324 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 SLC7A13Q8TCU3 470 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 NR4A3Q92570 626 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 GTPBP3Q969Y2 492 aaKnown RBP12.74□□□□□ -0.37
RNF43-202ENST00000577625 UPRTQ96BW1 309 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 ZC3H10Q96K80 434 aaKnown RBP12.74□□□□□ -0.37
RNF43-202ENST00000577625 SDF2Q99470 211 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 CDCA4Q9BXL8 241 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 ZNF350Q9GZX5 532 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 LDAHQ9H6V9 325 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 GALNT9Q9HCQ5 603 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 EXOSC4Q9NPD3 245 aaKnown RBP12.74□□□□□ -0.37
RNF43-202ENST00000577625 PRTFDC1Q9NRG1 225 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 SNTG1Q9NSN8 517 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 RDH8Q9NYR8 311 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 SLC13A4Q9UKG4 626 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 MGAT4BQ9UQ53 548 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 CHST2Q9Y4C5 530 aa12.74□□□□□ -0.37
RNF43-202ENST00000577625 OR2W5A6NFC9 320 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 SIGLEC6O43699 453 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 FOLR1P15328 257 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 S1PR1P21453 382 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 NUP62P37198 522 aaPredicted RBP12.73□□□□□ -0.37
RNF43-202ENST00000577625 TRIQKQ629K1 86 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 ZNF600Q6ZNG1 722 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 Q6ZPB1 254 aaPredicted RBP12.73□□□□□ -0.37
RNF43-202ENST00000577625 TMPRSS9Q7Z410 1059 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 KMT5CQ86Y97 462 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 TIGD4Q8IY51 512 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 HOXB13Q92826 284 aaPredicted RBP12.73□□□□□ -0.37
RNF43-202ENST00000577625 OR5M11Q96RB7 305 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 FNDC11Q9BVV2 318 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 MIXL1Q9H2W2 232 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 FOLH1BQ9HBA9 442 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 COPS3Q9UNS2 423 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 CLCA3PQ9Y6N3 262 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 PRSS44E7EML9 344 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 ZNF670-ZNF695F2Z2N8 137 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 M0R296 226 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 CLDN4O14493 209 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 HYAL3O43820 417 aaPredicted RBP12.73□□□□□ -0.37
RNF43-202ENST00000577625 OR10H3O60404 316 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 AK1P00568 194 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 PNLIPP16233 465 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 MAOAP21397 527 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 STX4Q12846 297 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 NR0B2Q15466 257 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 DCST2Q5T1A1 773 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 TTLL10Q6ZVT0 673 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 GLCCI1Q86VQ1 547 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 LINC00471Q8N535 108 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 ST8SIA2Q92186 375 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 GFM1Q96RP9 751 aaKnown RBP12.73□□□□□ -0.37
RNF43-202ENST00000577625 PELOQ9BRX2 385 aaKnown RBP12.73□□□□□ -0.37
RNF43-202ENST00000577625 WACQ9BTA9 647 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 SAP130Q9H0E3 1048 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 GAREM1Q9H706 876 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 CAPN10Q9HC96 672 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 MAN2C1Q9NTJ4 1040 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 KLHL28Q9NXS3 571 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 NLKQ9UBE8 527 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 ZNF443Q9Y2A4 671 aaPredicted RBP12.73□□□□□ -0.37
RNF43-202ENST00000577625 SESN1Q9Y6P5 492 aa12.73□□□□□ -0.37
RNF43-202ENST00000577625 hCG_1807616A0A1W2PRN6 198 aa12.72□□□□□ -0.37
RNF43-202ENST00000577625 CPED1A4D0V7 1026 aa12.72□□□□□ -0.37
RNF43-202ENST00000577625 PATE3B3GLJ2 98 aa12.72□□□□□ -0.37
RNF43-202ENST00000577625 YKT6O15498 198 aa12.72□□□□□ -0.37
RNF43-202ENST00000577625 LYRM1O43325 122 aa12.72□□□□□ -0.37
RNF43-202ENST00000577625 STX11O75558 287 aa12.72□□□□□ -0.37
RNF43-202ENST00000577625 SOX30O94993 753 aa12.72□□□□□ -0.37
RNF43-202ENST00000577625 OR5F1O95221 314 aa12.72□□□□□ -0.37
RNF43-202ENST00000577625 THBS1P07996 1170 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms