RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 POLR3GO15318 223 aaPredicted RBP11.24□□□□□ -0.61
SSH2-205ENST00000577483 RAMP1O60894 148 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 PLAUP00749 431 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 DBIP07108 87 aaKnown RBP11.24□□□□□ -0.61
SSH2-205ENST00000577483 NUDT7P0C024 238 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 TFPIP10646 304 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 PPP3CBP16298 524 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 CCNA2P20248 432 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 SFRP5Q5T4F7 317 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 WFDC8Q8IUA0 241 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 WFDC11Q8NEX6 87 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 TMEM19Q96HH6 336 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 MTHFD2LQ9H903 347 aaPredicted RBP11.24□□□□□ -0.61
SSH2-205ENST00000577483 OSGIN1Q9UJX0 560 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 CHST2Q9Y4C5 530 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 TMED7-TICAM2A0A0A6YYA0 188 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 TMEM72A0PK05 275 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 ZNF716A6NP11 495 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 TGDSO95455 350 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 PMS2P2O95744 297 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 ADAP00813 363 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 GKN3PP0CG01 181 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 CD99P14209 185 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 TACR3P29371 465 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 HOXC12P31275 282 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 MAGEA8P43361 318 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 OR3A2P47893 321 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 CRISP3P54108 245 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 CSNK2A1P68400 391 aaPredicted RBP11.24□□□□□ -0.61
SSH2-205ENST00000577483 EPS8Q12929 822 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 BEX5Q5H9J7 111 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 SEZ6L2Q6UXD5 910 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 MSRB3Q8IXL7 192 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 PEX5LQ8IYB4 626 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 C10orf111Q8N326 155 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 OR52P1PQ8NH57 321 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 OR10A4Q9H209 315 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 FANCFQ9NPI8 374 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 SLC52A3Q9NQ40 469 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 SLC25A37Q9NYZ2 338 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 CCDC167Q9P0B6 97 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 SLAMF8Q9P0V8 285 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 TMED7Q9Y3B3 224 aa11.24□□□□□ -0.61
SSH2-205ENST00000577483 SPIN1Q9Y657 262 aaPredicted RBP11.24□□□□□ -0.61
SSH2-205ENST00000577483 ZFHX3Q15911 3703 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 ZC3H12DA2A288 527 aaKnown RBP11.23□□□□□ -0.61
SSH2-205ENST00000577483 CFAP73A6NFT4 308 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 ZNF724A8MTY0 619 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 FAAHO00519 579 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 H2AFXP16104 143 aaPredicted RBP11.23□□□□□ -0.61
SSH2-205ENST00000577483 NTF4P34130 210 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 ACAA2P42765 397 aaKnown RBP11.23□□□□□ -0.61
SSH2-205ENST00000577483 AQP5P55064 265 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 STX1BP61266 288 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 RGNQ15493 299 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 ACKR1Q16570 336 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 BLOC1S3Q6QNY0 202 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 Q6ZT83 130 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 ATG4DQ86TL0 474 aaPredicted RBP11.23□□□□□ -0.61
SSH2-205ENST00000577483 MTDHQ86UE4 582 aaKnown RBP11.23□□□□□ -0.61
SSH2-205ENST00000577483 CCDC103Q8IW40 242 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 DYDC1Q8WWB3 177 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 PMM1Q92871 262 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 MAL2Q969L2 176 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 PLPPR2Q96GM1 343 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 TACO1Q9BSH4 297 aaKnown RBP11.23□□□□□ -0.61
SSH2-205ENST00000577483 CCDC28BQ9BUN5 200 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 DLL4Q9NR61 685 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 BEX4Q9NWD9 120 aaPredicted RBP11.23□□□□□ -0.61
SSH2-205ENST00000577483 ZNF443Q9Y2A4 671 aaPredicted RBP11.23□□□□□ -0.61
SSH2-205ENST00000577483 HDGFL3Q9Y3E1 203 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 C2CD3Q4AC94 2353 aa11.23□□□□□ -0.61
SSH2-205ENST00000577483 HEATR1Q9H583 2144 aaKnown RBP11.22□□□□□ -0.61
SSH2-205ENST00000577483 CADP27708 2225 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 IGKV3D-15A0A087WSY6 115 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 HMGB1P1B2RPK0 211 aaPredicted RBP11.22□□□□□ -0.61
SSH2-205ENST00000577483 CLIC1O00299 241 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 NR5A2O00482 541 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 LYZL6O75951 148 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 IMPDH2P12268 514 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 BMP2P12643 396 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 PRG2P13727 222 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 SLC1A3P43003 542 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 HTR3AP46098 478 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 POLR2HP52434 150 aaKnown RBP11.22□□□□□ -0.61
SSH2-205ENST00000577483 PPP2R2AP63151 447 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 H3F3AP84243 136 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 GNA13Q14344 377 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 TAB1Q15750 504 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 LIN52Q52LA3 116 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 PAGE3Q5JUK9 113 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 LRIF1Q5T3J3 769 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 RNF220Q5VTB9 566 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 ALKBH2Q6NS38 261 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 ZNF704Q6ZNC4 412 aaPredicted RBP11.22□□□□□ -0.61
SSH2-205ENST00000577483 HDXQ7Z353 690 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 CLIP4Q8N3C7 705 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 STEAP2Q8NFT2 490 aa11.22□□□□□ -0.61
SSH2-205ENST00000577483 KISS1RQ969F8 398 aaPredicted RBP11.22□□□□□ -0.61
SSH2-205ENST00000577483 CCL19Q99731 98 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms