RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 GOLGA8OA6NCC3 632 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 CCT8L1PA6NM43 557 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 A8MV72 311 aaPredicted RBP10.55□□□□□ -0.72
PRPF8-215ENST00000576958 ATP6V1G2-DDX39BF2Z307 99 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 GOLGA8NF8WBI6 632 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 PDLIM1O00151 329 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 TMCC2O75069 709 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 STX11O75558 287 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 HSPA4LO95757 839 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 BPGMP07738 259 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 MAPK1P28482 360 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 CDKN2CP42773 168 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 ETV4P43268 484 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 OR2B6P58173 313 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 VSNL1P62760 191 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 SYPL1Q16563 259 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 KRTAP24-1Q3LI83 254 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 LSM12Q3MHD2 195 aaKnown RBP10.55□□□□□ -0.72
PRPF8-215ENST00000576958 C16orf62Q7Z3J2 963 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 MTDHQ86UE4 582 aaKnown RBP10.55□□□□□ -0.72
PRPF8-215ENST00000576958 APH1AQ96BI3 265 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 AKTIPQ9H8T0 292 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 SEC61A2Q9H9S3 476 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 NGBQ9NPG2 151 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 SLC7A10Q9NS82 523 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 POU2F3Q9UKI9 436 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 NOSIPQ9Y314 301 aaKnown RBP10.55□□□□□ -0.72
PRPF8-215ENST00000576958 ARFGEF3Q5TH69 2177 aa10.55□□□□□ -0.72
PRPF8-215ENST00000576958 HEATR1Q9H583 2144 aaKnown RBP10.54□□□□□ -0.72
PRPF8-215ENST00000576958 CIB4A0PJX0 185 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 KLF11O14901 512 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 ANKRD28O15084 1053 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 TYROBPO43914 113 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 CHRM4P08173 479 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 IGHV4-31P0DP07 118 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 CDH2P19022 906 aaPredicted RBP10.54□□□□□ -0.72
PRPF8-215ENST00000576958 PRPS1L1P21108 318 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 IL12AP29459 219 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 IDH2P48735 452 aaKnown RBP10.54□□□□□ -0.72
PRPF8-215ENST00000576958 FABP6P51161 128 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 CLDN8P56748 225 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 MAPK11Q15759 364 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 ETFDHQ16134 617 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 MST1LQ2TV78 715 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 HIKESHIQ53FT3 197 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 SPANXN4Q5MJ08 99 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 COX20Q5RI15 118 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 TSPO2Q5TGU0 170 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.54□□□□□ -0.729e-7■■□□□ 13
PRPF8-215ENST00000576958 CASP12Q6UXS9 341 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 MUC15Q8N387 334 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 ZNF563Q8TA94 476 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 PNPT1Q8TCS8 783 aaKnown RBP10.54□□□□□ -0.72
PRPF8-215ENST00000576958 ST8SIA1Q92185 356 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 ROPN1LQ96C74 230 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 MUCL1Q96DR8 90 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 ZNF385AQ96PM9 386 aaKnown RBP10.54□□□□□ -0.72
PRPF8-215ENST00000576958 DHRS9Q9BPW9 319 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 INPP5KQ9BT40 448 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 SOX7Q9BT81 388 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 EML4Q9HC35 981 aaKnown RBP10.54□□□□□ -0.72
PRPF8-215ENST00000576958 SLC6A13Q9NSD5 602 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 CBLN4Q9NTU7 201 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 ATAD3AQ9NVI7 634 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 CHRNA9Q9UGM1 479 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 LGALS13Q9UHV8 139 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 MID2Q9UJV3 735 aa10.54□□□□□ -0.72
PRPF8-215ENST00000576958 HMGN4O00479 90 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 TLX2O43763 284 aaPredicted RBP10.53□□□□□ -0.72
PRPF8-215ENST00000576958 GSNP06396 782 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 KRT16P08779 473 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 ALDOCP09972 364 aaKnown RBP10.53□□□□□ -0.72
PRPF8-215ENST00000576958 PGCP20142 388 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 RPL3P39023 403 aaKnown RBP10.53□□□□□ -0.72
PRPF8-215ENST00000576958 TUBA1BP68363 451 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 TUBA4AP68366 448 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 EMX2Q04743 252 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 BNIP2Q12982 314 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 CHRFAM7AQ494W8 412 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 AGAP6Q5VW22 663 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 SAXO2Q658L1 398 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 TUBA1AQ71U36 451 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 EIF3MQ7L2H7 374 aaKnown RBP10.53□□□□□ -0.72
PRPF8-215ENST00000576958 LINGO2Q7L985 606 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 MYPOPQ86VE0 399 aaPredicted RBP10.53□□□□□ -0.72
PRPF8-215ENST00000576958 ANKS4BQ8N8V4 417 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 ZIC4Q8N9L1 334 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 C10orf105Q8TEF2 133 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 TNFRSF13CQ96RJ3 184 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 SORT1Q99523 831 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 RHNO1Q9BSD3 238 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 RLIMQ9NVW2 624 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 OSGIN1Q9UJX0 560 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 WDR45Q9Y484 360 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 FLVCR1Q9Y5Y0 555 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 ATP23Q9Y6H3 246 aa10.53□□□□□ -0.72
PRPF8-215ENST00000576958 TMED7-TICAM2A0A0A6YYA0 188 aa10.52□□□□□ -0.73
PRPF8-215ENST00000576958 NR5A2O00482 541 aa10.52□□□□□ -0.73
PRPF8-215ENST00000576958 PMS2P2O95744 297 aa10.52□□□□□ -0.73
PRPF8-215ENST00000576958 GKN3PP0CG01 181 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms