RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 FREM3P0C091 2139 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 ZNF708P17019 499 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 FUT4P22083 530 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 CXCR1P25024 350 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 SFTPDP35247 375 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 UQCRFS1P47985 274 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 ERFP50548 548 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 CDH12P55289 794 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 TAS2R41P59536 307 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 VLDLRP98155 873 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 SELENBP1Q13228 472 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 PIN1Q13526 163 aaPredicted RBP7.71□□□□□ -1.18
NUP88-211ENST00000575976 FLOT2Q14254 428 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 EIF2S3LQ2VIR3 472 aaKnown RBP7.71□□□□□ -1.18
NUP88-211ENST00000575976 TMEM176BQ3YBM2 270 aaPredicted RBP7.71□□□□□ -1.18
NUP88-211ENST00000575976 IQCCQ4KMZ1 466 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 ALG10BQ5I7T1 473 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 C3orf33Q6P1S2 294 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 ZNF585AQ6P3V2 769 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 ZNF613Q6PF04 617 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 ULK3Q6PHR2 472 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 Q6ZPB1 254 aaPredicted RBP7.71□□□□□ -1.18
NUP88-211ENST00000575976 GGNQ86UU5 652 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 CD163Q86VB7 1156 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 SPATA24Q86W54 205 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 ATCAYQ86WG3 371 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 AQP12AQ8IXF9 295 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 UBQLNLQ8IYU4 475 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 LILRA2Q8N149 483 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 RNF217Q8TC41 542 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 DNAJA4Q8WW22 397 aaPredicted RBP7.71□□□□□ -1.18
NUP88-211ENST00000575976 DNAJA3Q96EY1 480 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 SLC47A1Q96FL8 570 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 SLC41A3Q96GZ6 507 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 C7orf34Q96L11 122 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 KLHL15Q96M94 604 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 ZNF300Q96RE9 604 aaPredicted RBP7.71□□□□□ -1.18
NUP88-211ENST00000575976 SEPHS2Q99611 448 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 TRIM15Q9C019 465 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 OR11A1Q9GZK7 315 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 PRDM14Q9GZV8 571 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 C12orf10Q9HB07 376 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 CHRNA9Q9UGM1 479 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 RIMS3Q9UJD0 308 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 A4GNTQ9UNA3 340 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 OSGIN2Q9Y236 505 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 ENPP4Q9Y6X5 453 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 SHANK1Q9Y566 2161 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 BSNQ9UPA5 3926 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 BOD1L1Q8NFC6 3051 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 TLN1Q9Y490 2541 aaKnown RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 A0A087WUJ7 227 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 TRGV8A0A0C4DH27 118 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 A0A1W2PNR3 127 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 ZC3H12DA2A288 527 aaKnown RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 ELOA3DA6NLF2 546 aaPredicted RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 AHRRA9YTQ3 701 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 H0Y3Z8 333 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 EIF1AYO14602 144 aaKnown RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 TNFSF11O14788 317 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 FFAR1O14842 300 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 ZNF208O43345 1280 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 CHP2O43745 196 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 CIB2O75838 187 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 DIRAS1O95057 198 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 PRSS23O95084 383 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 OR5F1O95221 314 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 TFPIP10646 304 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 NQO1P15559 274 aaKnown RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 FOXD4Q12950 439 aaPredicted RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.7□□□□□ -1.18
NUP88-211ENST00000575976 CTU2Q2VPK5 515 aaKnown RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 ELOA3BQ3SY89 546 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 SYT14P1Q58G82 188 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 C1orf146Q5VVC0 180 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 C1QL3Q5VWW1 255 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 PLXDC2Q6UX71 529 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 LINC00114Q6XXX2 140 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 WDR88Q6ZMY6 472 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 ESPNLQ6ZVH7 1005 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 GDF7Q7Z4P5 450 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 DOLPP1Q86YN1 238 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 NKAIN4Q8IVV8 208 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 PM20D2Q8IYS1 436 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 ADGRG5Q8IZF4 528 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 MEIOBQ8N635 442 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 ELOA3Q8NG57 546 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 CANT1Q8WVQ1 401 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 SLC38A4Q969I6 547 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 ADGRG7Q96K78 797 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 ARL5BQ96KC2 179 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 PRRC1Q96M27 445 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 OR5B2Q96R09 309 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 TUBA1CQ9BQE3 449 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 PRSS27Q9BQR3 290 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 POLR2J2Q9GZM3 115 aaKnown RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 POLR2J3Q9H1A7 115 aaKnown RBP7.7□□□□□ -1.18
NUP88-211ENST00000575976 COQ10BQ9H8M1 238 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 IL1RAPQ9NPH3 570 aa7.7□□□□□ -1.18
NUP88-211ENST00000575976 SELENONQ9NZV5 590 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms