RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ZNF442Q9H7R0 627 aa5.11□□□□□ -1.59
SMG6-219ENST00000575663 SERINC1Q9NRX5 453 aa5.11□□□□□ -1.59
SMG6-219ENST00000575663 VPS29Q9UBQ0 182 aa5.11□□□□□ -1.59
SMG6-219ENST00000575663 GRID1Q9ULK0 1009 aa5.11□□□□□ -1.59
SMG6-219ENST00000575663 ACTL7BQ9Y614 415 aa5.11□□□□□ -1.59
SMG6-219ENST00000575663 YLPM1P49750 1951 aaKnown RBP5.11□□□□□ -1.59
SMG6-219ENST00000575663 GXYLT2A0PJZ3 443 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 DNAJC9-AS1A6NH13 148 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 MYO1GB0I1T2 1018 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 SULT2B1O00204 365 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 TIMM23O14925 209 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 PIN1P1O15428 100 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 PIAS1O75925 651 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 KCNK2O95069 426 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 OTCP00480 354 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 PRPS2P11908 318 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 PRKCAP17252 672 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 NPR2P20594 1047 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 ATP6V1C1P21283 382 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 ACHEP22303 614 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 GATA3P23771 443 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 MPGP29372 298 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 TIA1P31483 386 aaKnown RBP eCLIP5.1□□□□□ -1.59
SMG6-219ENST00000575663 GPC1P35052 558 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 SERPINB4P48594 390 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 DIO1P49895 249 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 CCR4P51679 360 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 UBE2NP61088 152 aaKnown RBP5.1□□□□□ -1.59
SMG6-219ENST00000575663 MYBPC1Q00872 1141 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 NAAAQ02083 359 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 POU3F1Q03052 451 aaPredicted RBP5.1□□□□□ -1.59
SMG6-219ENST00000575663 ACSM2AQ08AH3 577 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 ZNF763Q0D2J5 394 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 ZP4Q12836 540 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 CBFBQ13951 182 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 FASTKD3Q14CZ7 662 aaKnown RBP5.1□□□□□ -1.59
SMG6-219ENST00000575663 CD226Q15762 336 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 SLC9B1Q4ZJI4 515 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 GRTP1Q5TC63 336 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 DCAF12L2Q5VW00 463 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 ACSM2BQ68CK6 577 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 ACSM5Q6NUN0 579 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 SPATA21Q7Z572 469 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 MTDHQ86UE4 582 aaKnown RBP5.1□□□□□ -1.59
SMG6-219ENST00000575663 TREML1Q86YW5 311 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 CTAGE3PQ8IX95 158 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 ZBED8Q8IZ13 594 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 TMCO5AQ8N6Q1 288 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 PTGR2Q8N8N7 351 aaPredicted RBP5.1□□□□□ -1.59
SMG6-219ENST00000575663 CDRT4Q8N9R6 151 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 WDR31Q8NA23 367 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 SYT14Q8NB59 555 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 NUP37Q8NFH4 326 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 OR4F6Q8NGB9 312 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 C16orf78Q8WTQ4 265 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 SLC25A43Q8WUT9 341 aaPredicted RBP5.1□□□□□ -1.59
SMG6-219ENST00000575663 CKAP2Q8WWK9 683 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 C22orf15Q8WYQ4 148 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 RAB39BQ96DA2 213 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 ELP4Q96EB1 424 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 PHF21BQ96EK2 531 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 GPA33Q99795 319 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 TMPRSS13Q9BYE2 586 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 DPH5Q9H2P9 285 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 TPK1Q9H3S4 243 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 G6PC2Q9NQR9 355 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 FARSBQ9NSD9 589 aaKnown RBP5.1□□□□□ -1.59
SMG6-219ENST00000575663 PARPBPQ9NWS1 579 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 ZNF446Q9NWS9 450 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 OXSMQ9NWU1 459 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 PCTPQ9UKL6 214 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 TMCO1Q9UM00 188 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 SLC9A8Q9Y2E8 581 aa5.1□□□□□ -1.59
SMG6-219ENST00000575663 SPIN1Q9Y657 262 aaPredicted RBP5.1□□□□□ -1.59
SMG6-219ENST00000575663 CADP27708 2225 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 A0A087WUV0 522 aaPredicted RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 A0A1B0GUS0 222 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 SH3PXD2BA1X283 911 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 ZNF716A6NP11 495 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 CXorf49A8MYA2 514 aaPredicted RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 STX16-NPEPL1H3BU86 382 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 M0R233 179 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 PDLIM1O00151 329 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 GTPBP1O00178 669 aaKnown RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 STX16O14662 325 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 KLF11O14901 512 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 PIP5K1BO14986 540 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 SCAMP2O15127 329 aaKnown RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 PPIHO43447 177 aaKnown RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 DNPH1O43598 174 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 EFNA2O43921 213 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 NKX2-2O95096 273 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 MPZL1O95297 269 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 H6PDO95479 791 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 KNG1P01042 644 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 KRT6AP02538 564 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 KRT6BP04259 564 aa5.09□□□□□ -1.59
SMG6-219ENST00000575663 RNASE1P07998 156 aaKnown RBP5.09□□□□□ -1.59
SMG6-219ENST00000575663 MYZAPP0CAP1 466 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms