RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	TIGAR	Q9NQ88	270 aa		12.6	□□□□□ -0.39
EDC4-210	ENST00000575507	EXOSC3	Q9NQT5	275 aa	Known RBP	12.6	□□□□□ -0.39
EDC4-210	ENST00000575507	SLAMF8	Q9P0V8	285 aa		12.6	□□□□□ -0.39
EDC4-210	ENST00000575507	KLHL13	Q9P2N7	655 aa		12.6	□□□□□ -0.39
EDC4-210	ENST00000575507	NDUFAF1	Q9Y375	327 aa		12.6	□□□□□ -0.39
EDC4-210	ENST00000575507	CHST2	Q9Y4C5	530 aa		12.6	□□□□□ -0.39
EDC4-210	ENST00000575507	PCDHB14	Q9Y5E9	798 aa		12.6	□□□□□ -0.39
EDC4-210	ENST00000575507	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.6	□□□□□ -0.39
EDC4-210	ENST00000575507	GJE1	A6NN92	205 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	RAMP1	O60894	148 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	GOSR1	O95249	250 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	KRT75	O95678	551 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	RAF1	P04049	648 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	YES1	P07947	543 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	CD53	P19397	219 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	CCNA2	P20248	432 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	DNASE1	P24855	282 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	SLC7A1	P30825	629 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	CRAT	P43155	626 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	DIO1	P49895	249 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	CYLC2	Q14093	348 aa	Predicted RBP	12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	KRT72	Q14CN4	511 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	RNPS1	Q15287	305 aa	Known RBP	12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	SYT14P1	Q58G82	188 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	PAGE3	Q5JUK9	113 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	MRPL2	Q5T653	305 aa	Known RBP	12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	GTF2IRD2B	Q6EKJ0	949 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	C3orf33	Q6P1S2	294 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	TMPPE	Q6ZT21	453 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	GTF2IRD2	Q86UP8	949 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	GABRG1	Q8N1C3	465 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	FITM2	Q8N6M3	262 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	ZNF563	Q8TA94	476 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	SLC38A5	Q8WUX1	472 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	TMEM234	Q8WY98	164 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	REXO5	Q96IC2	774 aa	Known RBP	12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	ITCH	Q96J02	903 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	SLC25A37	Q9NYZ2	338 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	LEF1	Q9UJU2	399 aa	Predicted RBP	12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	DSPP	Q9NZW4	1301 aa		12.59	□□□□□ -0.39
EDC4-210	ENST00000575507	CYTIP	O60759	359 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	ANP32D	O95626	131 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	BCHE	P06276	602 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	PABPC4L	P0CB38	370 aa	Known RBP	12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	GKN3P	P0CG01	181 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	COX4I1	P13073	169 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	APOBEC1	P41238	236 aa	Known RBP	12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	ACAA2	P42765	397 aa	Known RBP	12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	RGN	Q15493	299 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	TMEM201	Q5SNT2	666 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	C6orf10	Q5SRN2	563 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	BEND4	Q6ZU67	534 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	TRPM8	Q7Z2W7	1104 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	GRINA	Q7Z429	371 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	CXorf67	Q86X51	503 aa	Predicted RBP	12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	SNX32	Q86XE0	403 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	TREML1	Q86YW5	311 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	CLIP4	Q8N3C7	705 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	DPP10	Q8N608	796 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	MBD6	Q96DN6	1003 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	BCO1	Q9HAY6	547 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	SERINC1	Q9NRX5	453 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	ZNF226	Q9NYT6	803 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	CHRNA9	Q9UGM1	479 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	PRSS50	Q9UI38	385 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	OSGIN1	Q9UJX0	560 aa		12.58	□□□□□ -0.4
EDC4-210	ENST00000575507	LOC100653049	A0A140TA62	436 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	TMEM72	A0PK05	275 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	ZC3H12D	A2A288	527 aa	Known RBP	12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	SULT2B1	O00204	365 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	CLIC1	O00299	241 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	KRT34	O76011	436 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	PLAU	P00749	431 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	NPPA	P01160	153 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	FES	P07332	822 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	TFPI	P10646	304 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	IMPDH2	P12268	514 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	PRG2	P13727	222 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	IL7R	P16871	459 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	PSMB1	P20618	241 aa	Known RBP	12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	TACR3	P29371	465 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	MNAT1	P51948	309 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	DSTN	P60981	165 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	TXNL4A	P83876	142 aa	Known RBP	12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	HPCA	P84074	193 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	RASGEF1B	Q0VAM2	473 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	EPS8	Q12929	822 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	KEAP1	Q14145	624 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	DEFB113	Q30KQ7	82 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	MMEL1	Q495T6	779 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	ZNF836	Q6ZNA1	936 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	CCDC103	Q8IW40	242 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	CMIP	Q8IY22	773 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	SLC43A2	Q8N370	569 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	PCYOX1L	Q8NBM8	494 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	OR52P1P	Q8NH57	321 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	WDR60	Q8WVS4	1066 aa		12.57	□□□□□ -0.4
EDC4-210	ENST00000575507	MAL2	Q969L2	176 aa		12.57	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms